RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RTBDNQ9BSG5 229 aaPredicted RBP2.56□□□□□ -2
HMGB1P25-201ENST00000468402 CHAC1Q9BUX1 264 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 CCDC90BQ9GZT6 254 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 MIXL1Q9H2W2 232 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 WFDC1Q9HC57 220 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 HMG20AQ9NP66 347 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 UBQLN4Q9NRR5 601 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 GSKIPQ9P0R6 139 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 TAC3Q9UHF0 121 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 ENOPH1Q9UHY7 261 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF223Q9UK11 482 aaPredicted RBP2.56□□□□□ -2
HMGB1P25-201ENST00000468402 DNAJC15Q9Y5T4 150 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF780BQ9Y6R6 833 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 WDR87Q6ZQQ6 2873 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 EXPH5Q8NEV8 1989 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 CABIN1Q9Y6J0 2220 aa2.56□□□□□ -2
HMGB1P25-201ENST00000468402 WDFY4Q6ZS81 3184 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 IGLV1-50A0A075B6I6 118 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TRAV8-3A0A0A6YYJ7 113 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TRAV8-1A0A0A6YYK1 113 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 LOC389332A0A1B0GUA5 103 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 C4orf51C9J302 202 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 KRBOX1C9JBD0 128 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 G3V2T6 193 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 AIPO00170 330 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 RGS5O15539 181 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 ORC5O43913 435 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 EIF1BO60739 113 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 CCDC22O60826 627 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 MED6O75586 246 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 STK16O75716 305 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 NDUFC2O95298 119 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 IGKV1D-16P01601 117 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TRBV12-3P01733 135 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TTRP02766 147 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OPN1SWP03999 348 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 REG1AP05451 166 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 CRYBA1P05813 215 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 CXCL2P19875 107 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 CXCL3P19876 107 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 RPS3P23396 243 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 IMPA1P29218 277 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 EIF1P41567 113 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 INPP1P49441 399 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 POLR2JP52435 117 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 DNAJB13P59910 316 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 GRB2P62993 217 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 PSG4Q00888 419 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 PRDX4Q13162 271 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 C16orf72Q14CZ0 275 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 MPPED2Q15777 294 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 Q499Y3 187 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TMEM128Q5BJH2 165 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SFXN4Q6P4A7 337 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 AGTRAPQ6RW13 159 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OOSP2Q86WS3 158 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 CLVS1Q8IUQ0 354 aaPredicted RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 DEFB123Q8N688 67 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF645Q8N7E2 425 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 LINC01555Q8NAE3 123 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TNRC6AQ8NDV7 1962 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OR51A2Q8NGJ7 313 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OR52P1PQ8NH57 321 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OR5W2Q8NH69 310 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 MBD3L1Q8WWY6 194 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 YIPF5Q969M3 257 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 YPEL4Q96NS1 127 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 PPP1R2P1Q96PQ5 205 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SPACA5Q96QH8 159 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 OR2A5Q96R48 311 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TBX5Q99593 518 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 MARVELD1Q9BSK0 173 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 GGTLC1Q9BX51 225 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SLC17A9Q9BYT1 436 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 TBL1XR1Q9BZK7 514 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 FGF23Q9GZV9 251 aaPredicted RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 RPS6KB2Q9UBS0 482 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF222Q9UK12 451 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SSR3Q9UNL2 185 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 POMPQ9Y244 141 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 YTHDF2Q9Y5A9 579 aaKnown RBP2.55□□□□□ -2
HMGB1P25-201ENST00000468402 SPEGQ15772 3267 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 VPS13AQ96RL7 3174 aa2.55□□□□□ -2
HMGB1P25-201ENST00000468402 ASCC3Q8N3C0 2202 aaKnown RBP2.54□□□□□ -2
HMGB1P25-201ENST00000468402 TECTAO75443 2155 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MED12Q93074 2177 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 KIAA1549Q9HCM3 1950 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 FRYLO94915 3013 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 IGKV1-27A0A075B6S5 117 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV3-64DA0A0J9YX35 117 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 IGHV5-10-1A0A0J9YXX1 117 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 A0A0X1KG70 313 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MAP1LC3B2A6NCE7 125 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 CCNKO75909 580 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 APOA2P02652 100 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 ZNF688P0C7X2 276 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 MPC1LP0DKB6 136 aa2.54□□□□□ -2
HMGB1P25-201ENST00000468402 GADD45AP24522 165 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms