RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 Q1T7F1 81 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 FAM27BQ5VT28 67 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 Q6ZSA8 131 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 TBC1D19Q8N5T2 526 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 ANKRD7Q92527 254 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 SLC35B4Q969S0 331 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 ARL5BQ96KC2 179 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 CNBD2Q96M20 576 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 Q96M85 177 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 ERMAPQ96PL5 475 aaPredicted RBP1.05□□□□□ -2.24
SMC4-205ENST00000465563 MRPL32Q9BYC8 188 aaKnown RBP1.05□□□□□ -2.24
SMC4-205ENST00000465563 CISHQ9NSE2 258 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 PAQR5Q9NXK6 330 aaPredicted RBP1.05□□□□□ -2.24
SMC4-205ENST00000465563 ZNF106Q9H2Y7 1883 aaKnown RBP1.05□□□□□ -2.24
SMC4-205ENST00000465563 PLXND1Q9Y4D7 1925 aa1.05□□□□□ -2.24
SMC4-205ENST00000465563 TECTAO75443 2155 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 IBA57-AS1B1ANH7 110 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 PPBPP02775 128 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 HIST1H1EP10412 219 aaKnown RBP1.04□□□□□ -2.24
SMC4-205ENST00000465563 HLA-DMBP28068 263 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 S100A7P31151 101 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 HIST1H4AP62805 103 aaKnown RBP1.04□□□□□ -2.24
SMC4-205ENST00000465563 UBE2IP63279 158 aaKnown RBP1.04□□□□□ -2.24
SMC4-205ENST00000465563 IMPG1Q17R60 797 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 SYPL2Q5VXT5 272 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 C10orf126Q8N4M7 172 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 ACOT12Q8WYK0 555 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 NAA38Q9BRA0 125 aaKnown RBP1.04□□□□□ -2.24
SMC4-205ENST00000465563 FUT9Q9Y231 359 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 LHFPL6Q9Y693 200 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 POLEQ07864 2286 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 GLI3P10071 1580 aa1.04□□□□□ -2.24
SMC4-205ENST00000465563 A0A0J9YY10 115 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 A0A1B0GX78 115 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 MEIS3P1A6NDR6 274 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 EEF1E1-BLOC1S5C9J1V9 151 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 IGHV3-7P01780 117 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 CALB1P05937 261 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 KCNE1P15382 129 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 MSNP26038 577 aaKnown RBP1.03□□□□□ -2.24
SMC4-205ENST00000465563 CCL20P78556 96 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 HIST3H3Q16695 136 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 ARHGAP11BQ3KRB8 267 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 SLC36A1Q7Z2H8 476 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 KLK6Q92876 244 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 RETNLBQ9BQ08 111 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 PARVGQ9HBI0 331 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 IL36BQ9NZH7 164 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 GUCA1BQ9UMX6 200 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 ADCY9O60503 1353 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 KIF24Q5T7B8 1368 aa1.03□□□□□ -2.24
SMC4-205ENST00000465563 ANAPC1Q9H1A4 1944 aa1.03□□□□□ -2.25
SMC4-205ENST00000465563 TGIF2-C20orf24A0A0A6YYL0 155 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 IGKV1D-43A0A0B4J1Z2 117 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 TRBV10-2A0A0K0K1G8 114 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 TRAPPC13A5PLN9 417 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 AHSA1O95433 338 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 CLPSP04118 112 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 SULT1A3P0DMM9 295 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 SULT1A4P0DMN0 295 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 COL4A5P29400 1685 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 AKR1C3P42330 323 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 MAGEA12P43365 314 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 ZNF80P51504 273 aaPredicted RBP1.02□□□□□ -2.25
SMC4-205ENST00000465563 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
SMC4-205ENST00000465563 IFITM2Q01629 132 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 RPL18Q07020 188 aaKnown RBP1.02□□□□□ -2.25
SMC4-205ENST00000465563 NCOA6Q14686 2063 aaPredicted RBP1.02□□□□□ -2.25
SMC4-205ENST00000465563 KISS1Q15726 138 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 C9orf64Q5T6V5 341 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 GLT8D1Q68CQ7 371 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 EML6Q6ZMW3 1958 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 C7orf65Q6ZTY9 151 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 FP248Q71RG6 208 aaPredicted RBP1.02□□□□□ -2.25
SMC4-205ENST00000465563 OR51D1Q8NGF3 324 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 EFCAB1Q9HAE3 211 aa1.02□□□□□ -2.25
SMC4-205ENST00000465563 TONSLQ96HA7 1378 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 TRBV20OR9-2A0A075B6H5 130 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 MEIKINA0A087WXM9 373 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 TRBV6-5A0A0K0K1A5 114 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 A0A1B0GV50 99 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 F8W036 122 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 KCNK1O00180 336 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 PRM2P04554 102 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 HAAOP46952 286 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 NNATQ16517 81 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 IBA57Q5T440 356 aaKnown RBP1.01□□□□□ -2.25
SMC4-205ENST00000465563 LPCAT4Q643R3 524 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 PTRHD1Q6GMV3 140 aaKnown RBP1.01□□□□□ -2.25
SMC4-205ENST00000465563 FAM173BQ6P4H8 233 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 UNQ6190/PRO20217Q6UXQ8 127 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 DHFR2Q86XF0 187 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 ZNF676Q8N7Q3 588 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 ZNF439Q8NDP4 499 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 MBD3L1Q8WWY6 194 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 CMTM6Q9NX76 183 aa1.01□□□□□ -2.25
SMC4-205ENST00000465563 LSM5Q9Y4Y9 91 aaKnown RBP1.01□□□□□ -2.25
SMC4-205ENST00000465563 IGKV2-29A2NJV5 120 aaPredicted RBP1□□□□□ -2.25
SMC4-205ENST00000465563 NOS1APO75052 506 aaPredicted RBP1□□□□□ -2.25
SMC4-205ENST00000465563 IGKV1-5P01602 117 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms