RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 KLK9Q2XQG4 91 aa18.31■□□□□ 0.52
SMKR1-201ENST00000462322 TERB2Q8NHR7 220 aa18.31■□□□□ 0.52
SMKR1-201ENST00000462322 TSC22D3Q99576 134 aa18.31■□□□□ 0.52
SMKR1-201ENST00000462322 KLK9Q9UKQ9 250 aa18.31■□□□□ 0.52
SMKR1-201ENST00000462322 S4R3C0 116 aa18.31■□□□□ 0.52
SMKR1-201ENST00000462322 IGLV11-55A0A075B6I3 123 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 CCDC160A6NGH7 325 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 PPP5D1E7EU14 171 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 IGLV1-51P01701 117 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 OR13C7P0DN81 318 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 GP9P14770 177 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 PIGPP57054 158 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 IL34Q6ZMJ4 242 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 HSD17B13Q7Z5P4 300 aaPredicted RBP18.3■□□□□ 0.52
SMKR1-201ENST00000462322 MCFD2Q8NI22 146 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 EEF1AKMT3Q96AZ1 226 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 PRNDQ9UKY0 176 aa18.3■□□□□ 0.52
SMKR1-201ENST00000462322 CTDSPLO15194 276 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 PTBP1P26599 531 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMKR1-201ENST00000462322 MEF2DQ14814 521 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 H2BFWTQ7Z2G1 175 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 ZFAND1Q8TCF1 268 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 SEC22AQ96IW7 307 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 NDUFA4L2Q9NRX3 87 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 FKBP11Q9NYL4 201 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 PEMTQ9UBM1 199 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 COL7A1Q02388 2944 aa18.29■□□□□ 0.52
SMKR1-201ENST00000462322 GGCTO75223 188 aaKnown RBP18.28■□□□□ 0.52
SMKR1-201ENST00000462322 IGKV1-39P01597 117 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 IGKV1D-39P04432 117 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 CSN3P07498 182 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 WT1-ASQ06250 92 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 FAAP20Q6NZ36 180 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 CLEC19AQ6UXS0 136 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 GDPD1Q8N9F7 314 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 LSM10Q969L4 123 aaKnown RBP18.28■□□□□ 0.52
SMKR1-201ENST00000462322 MRGPRFQ96AM1 343 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 CXorf58Q96LI9 332 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 CCDC140Q96MF4 163 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 COPZ2Q9P299 210 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 RSL24D1Q9UHA3 163 aaKnown RBP18.28■□□□□ 0.52
SMKR1-201ENST00000462322 DMRT1Q9Y5R6 373 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 SMAD5-AS1Q9Y6J3 95 aa18.28■□□□□ 0.52
SMKR1-201ENST00000462322 H0Y980 276 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 CYB5BO43169 146 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 HLA-AP01891 365 aaKnown RBP18.27■□□□□ 0.52
SMKR1-201ENST00000462322 TNFSF8P32971 234 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 ARL3P36405 182 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 CCDC71LQ8N9Z2 235 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 OR13C8Q8NGS7 320 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 OR5B3Q8NH48 314 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 OR4A16Q8NH70 328 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 MARCH1Q8TCQ1 289 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 TMEM14BQ9NUH8 114 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 THYN1Q9P016 225 aa18.27■□□□□ 0.52
SMKR1-201ENST00000462322 MFSD2BA6NFX1 497 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 C15orf61A6NNL5 157 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 DISC1C4P0D8 188 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 OR2C1O95371 312 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 AKAIN1P0CW23 69 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 MECP2P51608 486 aaKnown RBP18.26■□□□□ 0.51
SMKR1-201ENST00000462322 TMEM56Q96MV1 263 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 TP53RKQ96S44 253 aa18.26■□□□□ 0.51
SMKR1-201ENST00000462322 NXF2Q9GZY0 626 aaKnown RBP18.26■□□□□ 0.51
SMKR1-201ENST00000462322 TRBV7-1A0A0A6YYK4 115 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 C3orf85A0A1B0GTC6 90 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 FABP12A6NFH5 140 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 DBX1A6NMT0 343 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 GSTZ1O43708 216 aaPredicted RBP18.25■□□□□ 0.51
SMKR1-201ENST00000462322 SLC25A24Q6NUK1 477 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 OR4C16Q8NGL9 310 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 SIGLEC8Q9NYZ4 499 aa18.25■□□□□ 0.51
SMKR1-201ENST00000462322 CTSDP07339 412 aaPredicted RBP18.24■□□□□ 0.51
SMKR1-201ENST00000462322 C11orf87Q6NUJ2 197 aa18.24■□□□□ 0.51
SMKR1-201ENST00000462322 DNAH9Q9NYC9 4486 aa18.24■□□□□ 0.51
SMKR1-201ENST00000462322 CLEC3BP05452 202 aa18.23■□□□□ 0.51
SMKR1-201ENST00000462322 SOSTQ9BQB4 213 aa18.23■□□□□ 0.51
SMKR1-201ENST00000462322 C14orf166Q9Y224 244 aaKnown RBP18.23■□□□□ 0.51
SMKR1-201ENST00000462322 F11RQ9Y624 299 aaKnown RBP18.23■□□□□ 0.51
SMKR1-201ENST00000462322 ATG12O94817 140 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 AKR1C2P52895 323 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 TRIM16LQ309B1 348 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 SP6Q3SY56 376 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 GPHB5Q86YW7 130 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 ZNF502Q8TBZ5 544 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 VN1R17PQ8TDU5 208 aa18.22■□□□□ 0.51
SMKR1-201ENST00000462322 ANKRD20A5PA0PJZ0 165 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 IGKV1-5P01602 117 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 NHLRC4P0CG21 123 aaPredicted RBP18.21■□□□□ 0.51
SMKR1-201ENST00000462322 GPR183P32249 361 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 MFAP2P55001 183 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 SURF2Q15527 256 aaPredicted RBP18.21■□□□□ 0.51
SMKR1-201ENST00000462322 IZUMO4Q1ZYL8 232 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 FAM106AQ4KMX7 169 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 LCN12Q6JVE5 192 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 ASCL2Q99929 193 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 PRRT1Q99946 306 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 ZC4H2Q9NQZ6 224 aa18.21■□□□□ 0.51
SMKR1-201ENST00000462322 ZNF320A2RRD8 509 aa18.2■□□□□ 0.5
SMKR1-201ENST00000462322 LGALS9O00182 355 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms