RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GNG13Q9P2W3 67 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 DOCK11Q5JSL3 2073 aa8.71□□□□□ -1.01
PKP4-206ENST00000452162 IGHV4-30-2A0A087WSY4 118 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 COLCA2A8K830 154 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 RRHO14718 337 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 HRASP01112 189 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 FBP1P09467 338 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 BCL2P10415 239 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 COL8A2P25067 703 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 FGF8P55075 233 aaPredicted RBP8.71□□□□□ -1.02
PKP4-206ENST00000452162 DLX6P56179 175 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 PMS2P11Q13670 270 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 RHEBQ15382 184 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 CIARTQ8N365 385 aaPredicted RBP8.71□□□□□ -1.02
PKP4-206ENST00000452162 CYB561D1Q8N8Q1 229 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 C20orf24Q9BUV8 137 aa8.71□□□□□ -1.02
PKP4-206ENST00000452162 DVL1O14640 695 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 IFNA10P01566 189 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 MBP02144 154 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 HSPE1P61604 102 aaKnown RBP8.7□□□□□ -1.02
PKP4-206ENST00000452162 HNF4GQ14541 408 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 FFAR4Q5NUL3 377 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 H1FXQ92522 213 aaKnown RBP8.7□□□□□ -1.02
PKP4-206ENST00000452162 SLC35D1Q9NTN3 355 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 MTORP42345 2549 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 H7C2Y5 167 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 CD1BP29016 333 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 HOXA1P49639 335 aaPredicted RBP8.7□□□□□ -1.02
PKP4-206ENST00000452162 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 C15orf54Q8N8G6 183 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 C8orf31Q8N9H6 132 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 OR13D1Q8NGV5 346 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 ZNF596Q8TC21 504 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 C10orf105Q8TEF2 133 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 FAM168AQ92567 244 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 GGACTQ9BVM4 153 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
PKP4-206ENST00000452162 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
PKP4-206ENST00000452162 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 ZFP92A6NM28 416 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 H3BQ15 152 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
PKP4-206ENST00000452162 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 PDLIM4P50479 330 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 RELQ04864 619 aaPredicted RBP8.69□□□□□ -1.02
PKP4-206ENST00000452162 TMEM155Q4W5P6 130 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 ABHD12Q8N2K0 398 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 MAPK1IP1LQ8NDC0 245 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 OR10G9Q8NGN4 311 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 OR10G7Q8NGN6 311 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 MRPL20Q9BYC9 149 aaKnown RBP8.69□□□□□ -1.02
PKP4-206ENST00000452162 SLC39A9Q9NUM3 307 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 SRRM4A7MD48 611 aaKnown RBP8.69□□□□□ -1.02
PKP4-206ENST00000452162 RNF223E7ERA6 249 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 C17orf112F2Z3M2 114 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 UPK2O00526 184 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 NDUFA2O43678 99 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 DLK1P80370 383 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 FLI1Q01543 452 aaPredicted RBP8.69□□□□□ -1.02
PKP4-206ENST00000452162 FAM90A2PQ658T7 463 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 ZNF709Q8N972 641 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 LHX4Q969G2 390 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 SLC25A22Q9H936 323 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 PRNDQ9UKY0 176 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 ABCA2Q9BZC7 2435 aa8.69□□□□□ -1.02
PKP4-206ENST00000452162 A0A087X0M5 115 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 A0A1B0GX30 115 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 MYOD1P15172 320 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 DSCR9P59020 149 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 FAM71F2Q6NXP2 309 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 HIST1H2BAQ96A08 127 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 VAX2Q9UIW0 290 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 OR51B2Q9Y5P1 312 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 H0YJW9 148 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 J3QR06 171 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
PKP4-206ENST00000452162 MPDU1O75352 247 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 IFNA1P01562 189 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 FOLR2P14207 255 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 CD99P14209 185 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 CEBPGP53567 150 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 RAB11AP62491 216 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 AVPI1Q5T686 147 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 SLC24A4Q8NFF2 622 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 OR5AN1Q8NGI8 311 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 RAB39BQ96DA2 213 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 P2RX4Q99571 388 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
PKP4-206ENST00000452162 BPESC1Q9GZL8 116 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
PKP4-206ENST00000452162 A0A096LNT2 108 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 VWC2LB2RUY7 222 aa8.67□□□□□ -1.02
PKP4-206ENST00000452162 FSTL3O95633 263 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms