RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 PRDX2P32119 198 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 RPL29P47914 159 aaKnown RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 HERV-K104P63124 156 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 RAB31Q13636 194 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 DAZAP2Q15038 168 aaPredicted RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 HIVEP3Q5T1R4 2406 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 OR4P4Q8NGL7 312 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 H1FXQ92522 213 aaKnown RBP6.74□□□□□ -1.33
HPS4-205ENST00000429411 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
HPS4-205ENST00000429411 NAV3Q8IVL0 2385 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 GCN1Q92616 2671 aaKnown RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 LINC00473A8K010 186 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 CLDN14O95500 239 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 REG1BP48304 166 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 ERVFC1-1P60608 527 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 DMRTA1Q5VZB9 504 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 FAM214BQ7L5A3 538 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 LINC00596Q86U02 117 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 FDCSPQ8NFU4 85 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 ACY3Q96HD9 319 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 IMMP2LQ96T52 175 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 HSD17B10Q99714 261 aaKnown RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 CXXC4Q9H2H0 198 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PLXNB1O43157 2135 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 OR10J4P0C629 311 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 ARL14EPLP0DKL9 152 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 GATA2P23769 480 aaPredicted RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 DDTP30046 118 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 FOXF2Q12947 444 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 DPPA3Q6W0C5 159 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 OR1P1Q8NH06 330 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 TMEM160Q9NX00 188 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PROCRQ9UNN8 238 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 A0A087WWC5 75 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 C21orf140B9A014 251 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 SLC17A3O00476 420 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 CRYGCP07315 174 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 CECR9P0C854 216 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 MYOD1P15172 320 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 NTF3P20783 257 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PRSS8Q16651 343 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PRR31Q5SQ13 230 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
HPS4-205ENST00000429411 PSMG3Q9BT73 122 aaPredicted RBP6.73□□□□□ -1.33
HPS4-205ENST00000429411 HRASP01112 189 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 COL8A2P25067 703 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 KIAA1644Q3SXP7 199 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 OR8G5Q8NG78 346 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 GMPPAQ96IJ6 420 aaPredicted RBP6.72□□□□□ -1.33
HPS4-205ENST00000429411 MS4A10Q96PG2 267 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 PXMP4Q9Y6I8 212 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 TRAV3A0A0B4J244 114 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 IFITM10A6NMD0 228 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 K7EQM0 130 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 RRHO14718 337 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 MLNRO43193 412 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 ENSAO43768 121 aaKnown RBP6.72□□□□□ -1.33
HPS4-205ENST00000429411 TOX4O94842 621 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 OR9G9P0C7N8 305 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 PRB4P10163 310 aaPredicted RBP6.72□□□□□ -1.33
HPS4-205ENST00000429411 IRF2P14316 349 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 PKIAP61925 76 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 CYP2G1PQ6ZSU1 146 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 NHLRC2Q8NBF2 726 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 OR2V2Q96R30 315 aa6.72□□□□□ -1.33
HPS4-205ENST00000429411 PPIHO43447 177 aaKnown RBP6.71□□□□□ -1.33
HPS4-205ENST00000429411 CNIH1O95406 144 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 CBLN1P23435 193 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 IER3P46695 156 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 TMPRSS3P57727 454 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 KRTDAPP60985 99 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 PSG5Q15238 335 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 ACP7Q6ZNF0 438 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 Q6ZSR3 168 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 ZCCHC24Q8N2G6 241 aaKnown RBP6.71□□□□□ -1.33
HPS4-205ENST00000429411 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 WIPI2Q9Y4P8 454 aa6.71□□□□□ -1.33
HPS4-205ENST00000429411 TEP1Q99973 2627 aaKnown RBP6.71□□□□□ -1.33
HPS4-205ENST00000429411 SCO2A0A1W2PP80 73 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 FCN1O00602 326 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 HIST1H1BP16401 226 aaKnown RBP6.71□□□□□ -1.34
HPS4-205ENST00000429411 FXYD3Q14802 87 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 ATP6V1FQ16864 119 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 NRN1LQ496H8 165 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 SARAFQ96BY9 339 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 COQ2Q96H96 371 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 SGK494Q96LW2 274 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 P2RX4Q99571 388 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 MANBALQ9NQG1 85 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 CBLN4Q9NTU7 201 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 PMCHP20382 165 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 GZMHP20718 246 aa6.71□□□□□ -1.34
HPS4-205ENST00000429411 CCL8P80075 99 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms