RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 OPN1MWP04001 364 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 SERF2P84101 59 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 PRSS8Q16651 343 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 ETV3LQ6ZN32 361 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 TMEM182Q6ZP80 229 aaPredicted RBP12.2□□□□□ -0.46
ACTB-204ENST00000425660 Q6ZRG5 221 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 MARC2Q969Z3 335 aa12.2□□□□□ -0.46
ACTB-204ENST00000425660 A0A1W2PN81 502 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 SLC25A16P16260 332 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 CNTFRP26992 372 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 CHRNA7P36544 502 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 FHITP49789 147 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 FAM210AQ96ND0 272 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 PSMG3-AS1Q96PY0 264 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 RSG1Q9BU20 258 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 NBPF19A0A087WUL8 3843 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
ACTB-204ENST00000425660 CA2P00918 260 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 MAS1LP35410 378 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 LGALS4P56470 323 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 PJVKQ0ZLH3 352 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 SSX2Q16385 188 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 C2orf83Q53S99 150 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 PPP1R27Q86WC6 154 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 DYNAPQ8N1N2 210 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 AJUBAQ96IF1 538 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 A0A1B0GW64 132 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 PRH1P02810 166 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 KRTAP10-9P60411 292 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 DLK1P80370 383 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 EBI3Q14213 229 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 TOR2AQ5JU69 321 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 NPBQ8NG41 125 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 OR10W1Q8NGF6 305 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
ACTB-204ENST00000425660 A0A1W2PRD5 423 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 A0A1W2PRF3 423 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 A0A1W2PRM7 423 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 FNDC10F2Z333 226 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 I3L521 148 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 NDUFA3O95167 84 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 MOSP00540 346 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 IFNA4P05014 189 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 CAMLGP49069 296 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 WT1-ASQ06250 92 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 C17orf50Q8WW18 174 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 METTL1Q9UBP6 276 aaKnown RBP12.17□□□□□ -0.46
ACTB-204ENST00000425660 FBXO7Q9Y3I1 522 aa12.17□□□□□ -0.46
ACTB-204ENST00000425660 A0A096LNT2 108 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 MPDU1O75352 247 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 COMPP49747 757 aaPredicted RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 AKR1C8PQ5T2L2 129 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 NPCDR1Q9BY65 106 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 BEX4Q9NWD9 120 aaPredicted RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 CENPVL3A0A0U1RRI6 287 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 MSMBP08118 114 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 SAA4P35542 130 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 SNCAP37840 140 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 SSBP2P81877 361 aaPredicted RBP12.16□□□□□ -0.46
ACTB-204ENST00000425660 ZNF616Q08AN1 781 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 Q8N6K4 173 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 OR2T10Q8NGZ9 312 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 FAM213BQ8TBF2 198 aa12.16□□□□□ -0.46
ACTB-204ENST00000425660 NBR2O15453 112 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 ACTL6BO94805 426 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 FGF7P21781 194 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 MMDQ15546 238 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 ARSJQ5FYB0 599 aaPredicted RBP12.15□□□□□ -0.46
ACTB-204ENST00000425660 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
ACTB-204ENST00000425660 LSM4Q9Y4Z0 139 aaKnown RBP12.15□□□□□ -0.46
ACTB-204ENST00000425660 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 B4DSR2 109 aa12.14□□□□□ -0.47
ACTB-204ENST00000425660 NPFFO15130 113 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms