RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CACNA1BQ00975 2339 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 FBXL15Q9H469 300 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 SIAH2O43255 324 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 CAMPP49913 170 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM177Q53S58 311 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 FAM166AQ6J272 317 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 NABP2Q9BQ15 211 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 RNF126Q9BV68 326 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 C21orf62Q9NYP8 219 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 UFC1Q9Y3C8 167 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 PGPA6NDG6 321 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 B4DSR2 109 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM178BH3BS89 294 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 PF4P02776 101 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 RAB24Q969Q5 203 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 UPK2O00526 184 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 SMAD7O15105 426 aaKnown RBP14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 SAPCD1Q5SSQ6 148 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 MRPL20Q9BYC9 149 aaKnown RBP14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 TRBV6-6A0A0A6YYG2 114 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 CA2P00918 260 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 CYP2G1PQ6ZSU1 146 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 SLC25A33Q9BSK2 321 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 M0R1W7 72 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 CEACAM8P31997 349 aaPredicted RBP14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 FREM3P0C091 2139 aa14.03□□□□□ -0.16
PCDHA13-202ENST00000409494 C17orf98A8MV24 154 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 FOXG1P55316 489 aaPredicted RBP14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 SPANXN1Q5VSR9 72 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 PAQR4Q8N4S7 273 aaPredicted RBP14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 SSC4DQ8WTU2 575 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 PNRC2Q9NPJ4 139 aaKnown RBP14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM189A5PLL7 270 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 E9PQ18 207 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 OR2J3O76001 311 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 OR2D3Q8NGH3 330 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 IL36RNQ9UBH0 155 aa14.02□□□□□ -0.16
PCDHA13-202ENST00000409494 SNURFLB1AK76 121 aa14.02□□□□□ -0.17
PCDHA13-202ENST00000409494 FBXL7Q9UJT9 491 aa14.02□□□□□ -0.17
PCDHA13-202ENST00000409494 PLXNA2O75051 1894 aa14.02□□□□□ -0.17
PCDHA13-202ENST00000409494 TGIF2-C20orf24A0A0A6YYL0 155 aa14.02□□□□□ -0.17
PCDHA13-202ENST00000409494 MDC1Q14676 2089 aaKnown RBP14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 IER3P46695 156 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 GPR82Q96P67 336 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 CDC42EP3Q9UKI2 254 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 TEX50A0A1B0GTY4 177 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 MYOD1P15172 320 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 WDFY1Q8IWB7 410 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 NDUFB4O95168 129 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 GCSHP23434 173 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 LRP11Q86VZ4 500 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 F8VVB4 439 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 F8VWA3 439 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 CCL3L1P16619 93 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 RNF151Q2KHN1 245 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF474Q6S9Z5 364 aaPredicted RBP14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 CBY1Q9Y3M2 126 aa14.01□□□□□ -0.17
PCDHA13-202ENST00000409494 TMEM250H0YL14 139 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 MRPL54Q6P161 138 aaKnown RBP14□□□□□ -0.17
PCDHA13-202ENST00000409494 BIVMQ86UB2 503 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 NOTCH4Q99466 2003 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 TRAV34A0A0B4J273 112 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 TDGF1P13385 188 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF506Q5JVG8 444 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 PEMTQ9UBM1 199 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 CACNA1DQ01668 2161 aa14□□□□□ -0.17
PCDHA13-202ENST00000409494 H0YIZ8 118 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 IL4P05112 153 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 WDR25Q64LD2 544 aaPredicted RBP13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 OR52E5Q8NH55 327 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 GPR61Q9BZJ8 451 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 SAA2-SAA4A0A096LPE2 208 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 SAA2P0DJI9 122 aaPredicted RBP13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 GATA3P23771 443 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 CLDND2Q8NHS1 167 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 FGF16O43320 207 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 ZNF137PP52743 207 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 LRTM2Q8N967 370 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 TMEM144Q7Z5S9 345 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 RPRMQ9NS64 109 aa13.99□□□□□ -0.17
PCDHA13-202ENST00000409494 KIAA1671Q9BY89 1806 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 GGCTO75223 188 aaKnown RBP13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 ESPL1Q14674 2120 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 Q6ZS49 121 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 VKORC1L1Q8N0U8 176 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 C15orf61A6NNL5 157 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 SRSF6Q13247 344 aaKnown RBP13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 ELOBQ15370 118 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 FAM71F2Q6NXP2 309 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 OR1P1Q8NH06 330 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 SRD5A3Q9H8P0 318 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 BET1LQ9NYM9 111 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 M0R2Z0 102 aa13.98□□□□□ -0.17
PCDHA13-202ENST00000409494 LDLRAD4O15165 306 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms