RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NDUFA4L2Q9NRX3 87 aa15.37■□□□□ 0.05
PDLIM2-207ENST00000409417 KCNIP3Q9Y2W7 256 aa15.37■□□□□ 0.05
PDLIM2-207ENST00000409417 IGHV3-11P01762 117 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 PRH1P02810 166 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 P0C879 139 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 AKR1C2P52895 323 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 HSD17B13Q7Z5P4 300 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 OR4A16Q8NH70 328 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 ALX4Q9H161 411 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 MEGF8Q7Z7M0 2845 aa15.36■□□□□ 0.05
PDLIM2-207ENST00000409417 FAM223BA6NKX1 122 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 DBX1A6NMT0 343 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 RBMXL2O75526 392 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 DHFRP00374 187 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 AKR1C4P17516 323 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 CTRB1P17538 263 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 RHOGP84095 191 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 ZNF616Q08AN1 781 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 CTRB2Q6GPI1 263 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 FAM223AQ8IWN6 122 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 NECAP1Q8NC96 275 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 S100ZQ8WXG8 99 aa15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 RCC1LQ96I51 464 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-207ENST00000409417 CENPXA8MT69 81 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 RBMS2Q15434 407 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 KLK9Q2XQG4 91 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 OR10W1Q8NGF6 305 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 RBPMSQ93062 196 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 RRNAD1Q96FB5 475 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 TMEM56Q96MV1 263 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 C7orf50Q9BRJ6 194 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 CCDC32Q9BV29 185 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 KLK9Q9UKQ9 250 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 TMEM56-RWDD3S4R434 201 aa15.34■□□□□ 0.05
PDLIM2-207ENST00000409417 A0A0B4J293 547 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 LINC00854A0A1B0GVQ3 168 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 REG1AP05451 166 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 OR8U8P0C7N1 319 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 DEFA4P12838 97 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 CCR6P51684 374 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 RAB25P57735 213 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 SUPT4H1P63272 117 aaKnown RBP15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 IZUMO4Q1ZYL8 232 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 TMEM128Q5BJH2 165 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 SAMD5Q5TGI4 173 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 C19orf35Q6ZS72 473 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 TMED4Q7Z7H5 227 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 ZNF429Q86V71 674 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 LHFPL5Q8TAF8 219 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 DPF1Q92782 380 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 LSM10Q969L4 123 aaKnown RBP15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 HINT2Q9BX68 163 aa15.33■□□□□ 0.05
PDLIM2-207ENST00000409417 DUS4LO95620 317 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 HSPB1P04792 205 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 OR13C7P0DN81 318 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 IGLL1P15814 213 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 DEFA5Q01523 94 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 ATP5G2Q06055 141 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 WT1-ASQ06250 92 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 TMEM187Q14656 261 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 OXLD1Q5BKU9 147 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 ZNF343Q6P1L6 599 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 FAM219AQ8IW50 185 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 SELENOHQ8IZQ5 122 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 IL22RA2Q969J5 263 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 FANCD2OSQ96PS1 177 aa15.33■□□□□ 0.04
PDLIM2-207ENST00000409417 LINC01619G3V211 115 aa15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 G3V4G9 280 aa15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 OR2J3O76001 311 aa15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 ANXA3P12429 323 aa15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 HSPE1P61604 102 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 TMEM268Q5VZI3 342 aa15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 RNASE11Q8TAA1 199 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 MCRIP2Q9BUT9 160 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 RANGRFQ9HD47 186 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-207ENST00000409417 IGHV4OR15-8A0A075B7B6 117 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 A0A087WW49 117 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 NDUFB6O95139 128 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 SRPXP78539 464 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 C15orf32Q32M92 178 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 FBXL7Q9UJT9 491 aa15.31■□□□□ 0.04
PDLIM2-207ENST00000409417 IGLV11-55A0A075B6I3 123 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 A0A0G2JRQ6 117 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 PLA2G10O15496 165 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 BTCP35070 178 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 PRCDQ00LT1 54 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 C1QL4Q86Z23 238 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 CENPSQ8N2Z9 138 aa15.3■□□□□ 0.04
PDLIM2-207ENST00000409417 ANKRD34BA5PLL1 514 aa15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 EXOSC2Q13868 293 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 KPRPQ5T749 579 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 Q6ZRM9 215 aa15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 WDR12Q9GZL7 423 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 PRR13Q9NZ81 148 aa15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 PEF1Q9UBV8 284 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-207ENST00000409417 A0A0B4J2A0 478 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 PIGBOS1A0A0B4J2F0 54 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 CYB5BO43169 146 aa15.28■□□□□ 0.04
PDLIM2-207ENST00000409417 LYRM1O43325 122 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms