RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 FAM58AQ8N1B3 248 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 PTPRQQ9UMZ3 2332 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 RELNP78509 3460 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 TRBV6-6A0A0A6YYG2 114 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 IGHV2-26A0A0B4J1V2 119 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 C5orf49A4QMS7 147 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 CA6P23280 308 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 PCBD1P61457 104 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 RELBQ01201 579 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 FXYD3Q14802 87 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 STUMQ69YW2 141 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 RPRMLQ8N4K4 120 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 OR2D3Q8NGH3 330 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 TSKUQ8WUA8 353 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 V9GYV3 84 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 A0A1W2PN81 502 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 IGHG3P01860 377 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 FOXF2Q12947 444 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 MIC13Q5XKP0 118 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
LSP1-204ENST00000406638 RBMXL3Q8N7X1 1067 aaKnown RBP13.44□□□□□ -0.26
LSP1-204ENST00000406638 FAM122AQ96E09 287 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 NGFP01138 241 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 PPBPP02775 128 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 Q56UQ5 140 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 ZADH2Q8N4Q0 377 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 C9orf106Q8NAJ2 232 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 RAB1CQ92928 201 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
LSP1-204ENST00000406638 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
LSP1-204ENST00000406638 OR2D2Q9H210 308 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 WDR83OSQ9Y284 106 aa13.44□□□□□ -0.26
LSP1-204ENST00000406638 C17orf98A8MV24 154 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 VWA1Q6PCB0 445 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 DOLPP1Q86YN1 238 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 SPACA3Q8IXA5 215 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 OR4F17Q8NGA8 305 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 PRDM14Q9GZV8 571 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 CHD8Q9HCK8 2581 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 IGHV1-69-2A0A0G2JMI3 117 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 BMPR1BO00238 502 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 CNEP1R1Q8N9A8 125 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 ST6GALNAC6Q969X2 333 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 CST9LQ9H4G1 147 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 ZNF71Q9NQZ8 489 aaPredicted RBP13.43□□□□□ -0.26
LSP1-204ENST00000406638 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 IGHV3-64DA0A0J9YX35 117 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 NPIPB11E5RHQ5 1161 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 CXorf1O96002 111 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 STAG3L2P0CL84 134 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 STAG3L3P0CL85 134 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 PSG1P11464 419 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 IGLL1P15814 213 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 COLCA1Q6ZS62 124 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 NUDT10Q8NFP7 164 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 CLCF1Q9UBD9 225 aa13.43□□□□□ -0.26
LSP1-204ENST00000406638 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 TRBV9A0A0B4J1U6 114 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 FOXH1O75593 365 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 LYZL6O75951 148 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 P0C879 139 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 BRWD1-AS2P59051 145 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 PDLIM3Q53GG5 364 aaPredicted RBP13.42□□□□□ -0.26
LSP1-204ENST00000406638 OCIAD2Q56VL3 154 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 H2BFWTQ7Z2G1 175 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 SSMEM1Q8WWF3 244 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 C5orf30Q96GV9 206 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 RNF212BA8MTL3 300 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 CX3CL1P78423 397 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 TMEM249Q2WGJ8 235 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 SPATA31B1PQ5VZV4 182 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 ZNF439Q8NDP4 499 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 ABHD17AQ96GS6 310 aa13.42□□□□□ -0.26
LSP1-204ENST00000406638 CELA3BP08861 270 aa13.41□□□□□ -0.26
LSP1-204ENST00000406638 ASPHD1Q5U4P2 390 aa13.41□□□□□ -0.26
LSP1-204ENST00000406638 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
LSP1-204ENST00000406638 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
LSP1-204ENST00000406638 MPV17L2Q567V2 206 aa13.41□□□□□ -0.26
LSP1-204ENST00000406638 TXNDC17Q9BRA2 123 aa13.41□□□□□ -0.26
LSP1-204ENST00000406638 SEPSECSQ9HD40 501 aaKnown RBP13.41□□□□□ -0.26
LSP1-204ENST00000406638 INTS1Q8N201 2190 aaKnown RBP13.4□□□□□ -0.26
LSP1-204ENST00000406638 TRAV9-2A0A087WT02 112 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
LSP1-204ENST00000406638 WDR73Q6P4I2 378 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 MUC15Q8N387 334 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 OR5B3Q8NH48 314 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 ZNF596Q8TC21 504 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 NEUROG1Q92886 237 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 DKK4Q9UBT3 224 aa13.4□□□□□ -0.26
LSP1-204ENST00000406638 MT-ND6P03923 174 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms