RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ICE1Q9Y2F5 2266 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 NCOR2Q9Y618 2525 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SRRM4A7MD48 611 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 CLN5O75503 358 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 YIF1AO95070 293 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SAA1P0DJI8 122 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 RPS16P62249 146 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 RPL8P62917 257 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SSX2Q16385 188 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 ARSJQ5FYB0 599 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 MUC15Q8N387 334 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 OR4F5Q8NH21 305 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SLC35E1Q96K37 410 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 OR4F4Q96R69 305 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 METTL1Q9UBP6 276 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 CTSZQ9UBR2 303 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 RAXQ9Y2V3 346 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 ZFHX4Q86UP3 3567 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 CFAP47Q6ZTR5 3102 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 EPG5Q9HCE0 2579 aa14.43□□□□□ -0.1
HLA-DQB1-204ENST00000399084 KMT2BQ9UMN6 2715 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TRBV24-1A0A075B6N3 115 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 FCN3O75636 299 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 IGHV1-8P0DP01 117 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SUB1P53999 127 aaKnown RBP eCLIP14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRRX1P54821 245 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 B2MP61769 119 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 ZNF672Q499Z4 452 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 ANAPC16Q96DE5 110 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TCEAL7Q9BRU2 100 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 NDUFA4L2Q9NRX3 87 aa14.42□□□□□ -0.1
HLA-DQB1-204ENST00000399084 hCG_1809904A0A1W2PP81 198 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 A0A1W2PR64 198 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 A0A1W2PRV1 198 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 C11orf94C9JXX5 98 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 UBE2CO00762 179 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PAGE4O60829 102 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 S100A8P05109 93 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRR20EP86478 221 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRR20CP86479 221 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRR20DP86480 221 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRR20BP86481 221 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PRR20AP86496 221 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TGIF2LXQ8IUE1 241 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 SSX3Q99909 188 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TMEM133Q9H2Q1 129 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TMPRSS5Q9H3S3 457 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 DOK5Q9P104 306 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 VMA21Q3ZAQ7 101 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 RNASEH2CQ8TDP1 164 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 PARLQ9H300 379 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 CHODLQ9H9P2 273 aa14.41□□□□□ -0.1
HLA-DQB1-204ENST00000399084 CD99P14209 185 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 RPS10P46783 165 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 HLA-DRB5Q30154 266 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 MIC13Q5XKP0 118 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 ZFP82Q8N141 532 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 C8orf46Q8TAG6 207 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 C2CD4CQ8TF44 421 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 Q8WTZ3 238 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 BTF3L4Q96K17 158 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 HINT2Q9BX68 163 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 MGAQ8IWI9 3026 aa14.4□□□□□ -0.1
HLA-DQB1-204ENST00000399084 TET2Q6N021 2002 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 SPNS3Q6ZMD2 512 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 STPG3Q8N7X2 389 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 TEX45Q8NA69 505 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 LINC01560Q8TB33 94 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 C1orf159Q96HA4 380 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RNF2Q99496 336 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RAB1BQ9H0U4 201 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 MIOXQ9UGB7 285 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 SLC45A2Q9UMX9 530 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 YLPM1P49750 1951 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 MAP1BP46821 2468 aaKnown RBP14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 PTPRQQ9UMZ3 2332 aa14.39□□□□□ -0.11
HLA-DQB1-204ENST00000399084 TPRP12270 2363 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 AP4M1O00189 453 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 HMGB3O15347 200 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 IGHV2-5P01817 119 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RNASE2P10153 161 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 CD69Q07108 199 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 IQCF2Q8IXL9 164 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 C11orf42Q8N5U0 333 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 BEND2Q8NDZ0 799 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 FAM90A27PA6NNH2 459 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 IGHV2-70P01814 119 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 S100PP25815 95 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 ERVFRD-1P60508 538 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 SNRPEP62304 92 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RPL23P62829 140 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RPUSD4Q96CM3 377 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 RNF5Q99942 180 aa14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 AMMECR1Q9Y4X0 333 aaPredicted RBP14.38□□□□□ -0.11
HLA-DQB1-204ENST00000399084 PPP1R2P9O14990 202 aa14.37□□□□□ -0.11
HLA-DQB1-204ENST00000399084 AKR1D1P51857 326 aa14.37□□□□□ -0.11
HLA-DQB1-204ENST00000399084 ADIRFQ15847 76 aa14.37□□□□□ -0.11
HLA-DQB1-204ENST00000399084 FAM210BQ96KR6 192 aa14.37□□□□□ -0.11
HLA-DQB1-204ENST00000399084 OR5B12Q96R08 314 aa14.37□□□□□ -0.11
HLA-DQB1-204ENST00000399084 PYGO2Q9BRQ0 406 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms