RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRAPPC2LQ9UL33 140 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 AMMECR1Q9Y4X0 333 aaPredicted RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 A0A0J9YY10 115 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 LOC102725191A0A1B0GVB3 256 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 A0A1B0GX78 115 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 POP7O75817 140 aaKnown RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 SLC25A14O95258 325 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 CDS2O95674 445 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 LY6G6DO95868 133 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 IFNA10P01566 189 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 IFNA7P01567 189 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 CFC1BP0CG36 223 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 NPY1RP25929 384 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 CMPK1P30085 196 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 NUDT1P36639 197 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 OPRK1P41145 380 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 CRISP3P54108 245 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TIMM10P62072 90 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 HIST1H1AQ02539 215 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 DHRS2Q13268 280 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TNS3Q68CZ2 1445 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TET2Q6N021 2002 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF613Q6PF04 617 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 Q6ZS49 121 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 WDR86Q86TI4 376 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TSTD1Q8NFU3 115 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 LMX1AQ8TE12 382 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 RAB2BQ8WUD1 216 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 ACOT12Q8WYK0 555 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF414Q96IQ9 312 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 ABCA3Q99758 1704 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 OR2H1Q9GZK4 316 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 CACYBPQ9HB71 228 aaKnown RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TMEM38BQ9NVV0 291 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 COA4Q9NYJ1 87 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 TVP23BQ9NYZ1 205 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF230Q9UIE0 474 aaPredicted RBP3.5□□□□□ -1.85
GABPB1-204ENST00000396464 AK3Q9UIJ7 227 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 PRSS21Q9Y6M0 314 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 IQSEC2Q5JU85 1478 aa3.5□□□□□ -1.85
GABPB1-204ENST00000396464 DOCK6Q96HP0 2047 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TRPM3Q9HCF6 1732 aaPredicted RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 SSH2Q76I76 1423 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 FAM25AB3EWG3 89 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 FAM25CB3EWG5 89 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 FAM25GB3EWG6 89 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 C9JAW5 83 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 SOCS1O15524 211 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 RGS5O15539 181 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TNFSF15O95150 251 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 FAM107AO95990 144 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 CXorf1O96002 111 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 IGHV3-13P01766 116 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 SRIP30626 198 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 PSG9Q00887 426 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 EMX2Q04743 252 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 ATP5G2Q06055 141 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 PLCXD2Q0VAA5 305 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF525Q8N782 197 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 SLC30A7Q8NEW0 376 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 OR4A5Q8NH83 315 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 C2orf15Q8WU43 125 aaKnown RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TCEAL7Q9BRU2 100 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 TSSK6Q9BXA6 273 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 WDR61Q9GZS3 305 aaKnown RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 OR2D2Q9H210 308 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 VCXQ9H320 206 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 HIGD1AQ9Y241 93 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 MED31Q9Y3C7 131 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 MRPS16Q9Y3D3 137 aaKnown RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 AHDC1Q5TGY3 1603 aaPredicted RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 MAP2P11137 1827 aaKnown RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 SHPRHQ149N8 1683 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 THSD7AQ9UPZ6 1657 aa3.49□□□□□ -1.85
GABPB1-204ENST00000396464 MARF1Q9Y4F3 1742 aaKnown RBP3.49□□□□□ -1.85
GABPB1-204ENST00000396464 BCL9O00512 1426 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 VIRMAQ69YN4 1812 aaKnown RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 A0A087WUU8 490 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 TMEM269A0A1B0GVZ9 245 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 A0A1W2PPR1 153 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 TXNDC9O14530 226 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 CGAP01215 116 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 MAS1P04201 325 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF806P0C7X5 589 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF823P16415 610 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 IL1RNP18510 177 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 UBE2AP49459 152 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 KLF3P57682 345 aaPredicted RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 NEDD8Q15843 81 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 MORN2Q502X0 79 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
GABPB1-204ENST00000396464 DNLZQ5SXM8 178 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 GLT8D1Q68CQ7 371 aa3.48□□□□□ -1.85
GABPB1-204ENST00000396464 PRSS54Q6PEW0 395 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms