RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
UPK3A-202ENST00000396082 THYN1Q9P016 225 aa13.38□□□□□ -0.27
UPK3A-202ENST00000396082 PRNDQ9UKY0 176 aa13.38□□□□□ -0.27
UPK3A-202ENST00000396082 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
UPK3A-202ENST00000396082 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
UPK3A-202ENST00000396082 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 CD74P04233 296 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 OR13C7P0DN81 318 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 MECP2P51608 486 aaKnown RBP13.37□□□□□ -0.27
UPK3A-202ENST00000396082 MEF2DQ14814 521 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 CLEC19AQ6UXS0 136 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 OR10W1Q8NGF6 305 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 MCFD2Q8NI22 146 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 ZFAND1Q8TCF1 268 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 FKBP11Q9NYL4 201 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 SMAD5-AS1Q9Y6J3 95 aa13.37□□□□□ -0.27
UPK3A-202ENST00000396082 GGCTO75223 188 aaKnown RBP13.36□□□□□ -0.27
UPK3A-202ENST00000396082 IGLV1-51P01701 117 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 ARL3P36405 182 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 RND3P61587 244 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 CADM3Q8N126 398 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 CCDC71LQ8N9Z2 235 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 TERB2Q8NHR7 220 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 LSM10Q969L4 123 aaKnown RBP13.36□□□□□ -0.27
UPK3A-202ENST00000396082 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 TMEM56Q96MV1 263 aa13.36□□□□□ -0.27
UPK3A-202ENST00000396082 SLIRPQ9GZT3 109 aaKnown RBP13.36□□□□□ -0.27
UPK3A-202ENST00000396082 DISC1C4P0D8 188 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 H0Y980 276 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 CTDSPLO15194 276 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 PTBP1P26599 531 aaKnown RBP eCLIP13.35□□□□□ -0.27
UPK3A-202ENST00000396082 FAAP20Q6NZ36 180 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 OR13C8Q8NGS7 320 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 CCDC140Q96MF4 163 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 NDUFA4L2Q9NRX3 87 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 RSL24D1Q9UHA3 163 aaKnown RBP13.35□□□□□ -0.27
UPK3A-202ENST00000396082 CEPT1Q9Y6K0 416 aa13.35□□□□□ -0.27
UPK3A-202ENST00000396082 TRBV7-1A0A0A6YYK4 115 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 HLA-AP01891 365 aaKnown RBP13.34□□□□□ -0.27
UPK3A-202ENST00000396082 AKR1C2P52895 323 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 WT1-ASQ06250 92 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 C11orf87Q6NUJ2 197 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 SLC25A24Q6NUK1 477 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 SEC22AQ96IW7 307 aa13.34□□□□□ -0.27
UPK3A-202ENST00000396082 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
UPK3A-202ENST00000396082 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 FABP12A6NFH5 140 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 ATG12O94817 140 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 OR2C1O95371 312 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 IGKV1-39P01597 117 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 IGKV1D-39P04432 117 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 CSN3P07498 182 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 TNFSF8P32971 234 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 KLK9Q2XQG4 91 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 TRIM16LQ309B1 348 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 IL34Q6ZMJ4 242 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 TP53RKQ96S44 253 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.28
UPK3A-202ENST00000396082 DBX1A6NMT0 343 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
UPK3A-202ENST00000396082 GPR183P32249 361 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 RNASE11Q8TAA1 199 aaKnown RBP13.32□□□□□ -0.28
UPK3A-202ENST00000396082 ASCL2Q99929 193 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 PRRT1Q99946 306 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 ZC4H2Q9NQZ6 224 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 TMEM14BQ9NUH8 114 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 SIGLEC8Q9NYZ4 499 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
UPK3A-202ENST00000396082 F11RQ9Y624 299 aaKnown RBP13.32□□□□□ -0.28
UPK3A-202ENST00000396082 ZNF320A2RRD8 509 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 GSTZ1O43708 216 aaPredicted RBP13.31□□□□□ -0.28
UPK3A-202ENST00000396082 CLEC3BP05452 202 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 SP6Q3SY56 376 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 FAM106AQ4KMX7 169 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 Q8N402 240 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 OR1L6Q8NGR2 347 aa13.31□□□□□ -0.28
UPK3A-202ENST00000396082 NXF2Q9GZY0 626 aaKnown RBP13.31□□□□□ -0.28
UPK3A-202ENST00000396082 TEX13DA0A0J9YY54 714 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-202ENST00000396082 NHLRC4P0CG21 123 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-202ENST00000396082 S100A5P33763 92 aa13.3□□□□□ -0.28
UPK3A-202ENST00000396082 SURF2Q15527 256 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-202ENST00000396082 PLET1Q6UQ28 207 aa13.3□□□□□ -0.28
UPK3A-202ENST00000396082 GPHB5Q86YW7 130 aa13.3□□□□□ -0.28
UPK3A-202ENST00000396082 SGPP2Q8IWX5 399 aa13.3□□□□□ -0.28
UPK3A-202ENST00000396082 ZNF502Q8TBZ5 544 aa13.3□□□□□ -0.28
UPK3A-202ENST00000396082 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms