RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 OR5B3Q8NH48 314 aa15.78■□□□□ 0.12
CLDN3-201ENST00000395145 GALNT14Q96FL9 552 aa15.78■□□□□ 0.12
CLDN3-201ENST00000395145 NDUFA4L2Q9NRX3 87 aa15.78■□□□□ 0.12
CLDN3-201ENST00000395145 OR51B2Q9Y5P1 312 aa15.78■□□□□ 0.12
CLDN3-201ENST00000395145 C13orf42A0A1B0GVH6 325 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 FAM223BA6NKX1 122 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 RBMXL2O75526 392 aaKnown RBP15.77■□□□□ 0.12
CLDN3-201ENST00000395145 IGHV3-11P01762 117 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 TRAPPC2P0DI81 140 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 TRAPPC2BP0DI82 140 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 HSD17B13Q7Z5P4 300 aaPredicted RBP15.77■□□□□ 0.12
CLDN3-201ENST00000395145 FAM223AQ8IWN6 122 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 SGPP2Q8IWX5 399 aa15.77■□□□□ 0.12
CLDN3-201ENST00000395145 RCC1LQ96I51 464 aaKnown RBP15.77■□□□□ 0.12
CLDN3-201ENST00000395145 ALX4Q9H161 411 aaPredicted RBP15.77■□□□□ 0.12
CLDN3-201ENST00000395145 DBX1A6NMT0 343 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 PRH1P02810 166 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 OR8U8P0C7N1 319 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 AKR1C2P52895 323 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 RHOGP84095 191 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 NECAP1Q8NC96 275 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 OR4A16Q8NH70 328 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 LHFPL5Q8TAF8 219 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 S100ZQ8WXG8 99 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 RBPMSQ93062 196 aaKnown RBP15.76■□□□□ 0.11
CLDN3-201ENST00000395145 C7orf50Q9BRJ6 194 aaKnown RBP15.76■□□□□ 0.11
CLDN3-201ENST00000395145 KCNIP3Q9Y2W7 256 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 MEGF8Q7Z7M0 2845 aa15.76■□□□□ 0.11
CLDN3-201ENST00000395145 G3V4G9 280 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 DUS4LO95620 317 aaKnown RBP15.75■□□□□ 0.11
CLDN3-201ENST00000395145 DHFRP00374 187 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 HSPB1P04792 205 aaKnown RBP15.75■□□□□ 0.11
CLDN3-201ENST00000395145 SUPT4H1P63272 117 aaKnown RBP15.75■□□□□ 0.11
CLDN3-201ENST00000395145 RBMS2Q15434 407 aaKnown RBP15.75■□□□□ 0.11
CLDN3-201ENST00000395145 ZNF343Q6P1L6 599 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 ZNF429Q86V71 674 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 OR10W1Q8NGF6 305 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 LSM10Q969L4 123 aaKnown RBP15.75■□□□□ 0.11
CLDN3-201ENST00000395145 TMEM56Q96MV1 263 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 FANCD2OSQ96PS1 177 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 TMEM56-RWDD3S4R434 201 aa15.75■□□□□ 0.11
CLDN3-201ENST00000395145 IGHV4OR15-8A0A075B7B6 117 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 A0A087WW49 117 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 LINC01619G3V211 115 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 REG1AP05451 166 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 IGLL1P15814 213 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 AKR1C4P17516 323 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 DEFA5Q01523 94 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 WT1-ASQ06250 92 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 TMEM187Q14656 261 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 IZUMO4Q1ZYL8 232 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 OXLD1Q5BKU9 147 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 KPRPQ5T749 579 aaPredicted RBP15.74■□□□□ 0.11
CLDN3-201ENST00000395145 C19orf35Q6ZS72 473 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 FAM219AQ8IW50 185 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 SELENOHQ8IZQ5 122 aaKnown RBP15.74■□□□□ 0.11
CLDN3-201ENST00000395145 DPF1Q92782 380 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 IL22RA2Q969J5 263 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 RRNAD1Q96FB5 475 aaKnown RBP15.74■□□□□ 0.11
CLDN3-201ENST00000395145 CCDC32Q9BV29 185 aa15.74■□□□□ 0.11
CLDN3-201ENST00000395145 A0A0B4J293 547 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 A0A0G2JRQ6 117 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 CENPXA8MT69 81 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 HIST1H1BP16401 226 aaKnown RBP15.73■□□□□ 0.11
CLDN3-201ENST00000395145 RAB25P57735 213 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 BEAN1Q3B7T3 259 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 TMEM128Q5BJH2 165 aa15.73■□□□□ 0.11
CLDN3-201ENST00000395145 MCRIP2Q9BUT9 160 aaKnown RBP15.73■□□□□ 0.11
CLDN3-201ENST00000395145 IGLV11-55A0A075B6I3 123 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 OR2J3O76001 311 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 NDUFB6O95139 128 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 OR13C7P0DN81 318 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 BTCP35070 178 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 CCR6P51684 374 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 HSPE1P61604 102 aaKnown RBP15.72■□□□□ 0.11
CLDN3-201ENST00000395145 PRCDQ00LT1 54 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 ATP5G2Q06055 141 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 TMED4Q7Z7H5 227 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 C1QL4Q86Z23 238 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 HINT2Q9BX68 163 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 GPR61Q9BZJ8 451 aa15.72■□□□□ 0.11
CLDN3-201ENST00000395145 RANGRFQ9HD47 186 aaPredicted RBP15.72■□□□□ 0.11
CLDN3-201ENST00000395145 LINC00854A0A1B0GVQ3 168 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 ANXA3P12429 323 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 DEFA4P12838 97 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 C15orf32Q32M92 178 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 AARDQ4LEZ3 155 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 FAM209BQ5JX69 171 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 TMEM268Q5VZI3 342 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 RNASE11Q8TAA1 199 aaKnown RBP15.71■□□□□ 0.11
CLDN3-201ENST00000395145 FBXL7Q9UJT9 491 aa15.71■□□□□ 0.11
CLDN3-201ENST00000395145 PLA2G10O15496 165 aa15.7■□□□□ 0.1
CLDN3-201ENST00000395145 SRPXP78539 464 aa15.7■□□□□ 0.1
CLDN3-201ENST00000395145 EXOSC2Q13868 293 aaKnown RBP15.7■□□□□ 0.1
CLDN3-201ENST00000395145 CENPSQ8N2Z9 138 aa15.7■□□□□ 0.1
CLDN3-201ENST00000395145 PEF1Q9UBV8 284 aaKnown RBP15.7■□□□□ 0.1
CLDN3-201ENST00000395145 DMRT1Q9Y5R6 373 aa15.7■□□□□ 0.1
CLDN3-201ENST00000395145 F11RQ9Y624 299 aaKnown RBP15.7■□□□□ 0.1
CLDN3-201ENST00000395145 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.69■□□□□ 0.1
CLDN3-201ENST00000395145 PIGBOS1A0A0B4J2F0 54 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms