RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 KRTAP4-5Q9BYR2 181 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 TTTY13Q9BZ97 58 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 C20orf27Q9GZN8 174 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 LYRM2Q9NU23 88 aaPredicted RBP0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 ACER3Q9NUN7 267 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 ASF1BQ9NVP2 202 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 TVP23BQ9NYZ1 205 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 IL36BQ9NZH7 164 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 MED11Q9P086 117 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 KLK12Q9UKR0 248 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 FUT9Q9Y231 359 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 GINS2Q9Y248 185 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF443Q9Y2A4 671 aaPredicted RBP0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 KLK5Q9Y337 293 aaPredicted RBP0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 AMMECR1Q9Y4X0 333 aaPredicted RBP0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 SMAD5-AS1Q9Y6J3 95 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 MIA2Q96PC5 1412 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 MYH2Q9UKX2 1941 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 HEATR5AQ86XA9 2040 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 ABCC12Q96J65 1359 aa0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 PRRC2AP48634 2157 aaKnown RBP0.69□□□□□ -2.3
TRAJ3-201ENST00000390534 ARID1AO14497 2285 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 LCTP09848 1927 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 IGKV2D-24A0A075B6R9 120 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 TRAV40A0A0B4J280 105 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 A0A1B0GW54 56 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 DUXBA0A1W2PPF3 345 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 GRIFINA4D1Z8 144 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 VPS37CA5D8V6 355 aaPredicted RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RIIAD1A6NNX1 92 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FABP5P3A8MUU1 101 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 C1orf196B1AJZ1 125 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FHAD1B1AJZ9 1412 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 GGTLC3B5MD39 225 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 BUB1B-PAK6H3BSN5 160 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 H3BT86 120 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RPL36A-HNRNPH2H7BZ11 118 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 AIPO00170 330 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 TXNDC9O14530 226 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CST8O60676 142 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 PFDN1O60925 122 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 BANF1O75531 89 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 OR2J2O76002 312 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 NDUFB2O95178 105 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 DHFRP00374 187 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 IFNA7P01567 189 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HMGN1P05114 100 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CSN2P05814 226 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 DNAH10OSP0CZ25 163 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SCGB1A1P11684 91 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CCL5P13501 91 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BOP23527 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BBP33778 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 G6PCP35575 357 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 EMP1P54849 157 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FOXA1P55317 472 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 PIGPP57054 158 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BDP58876 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BCP62807 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FLI1Q01543 452 aaPredicted RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MEF2BQ02080 365 aaPredicted RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF117Q03924 483 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RPL18Q07020 188 aaKnown RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MOBPQ13875 183 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SMCO1Q147U7 214 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 KISS1Q15726 138 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF141Q15928 474 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST2H2BEQ16778 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 LCE3CQ5T5A8 94 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SAMD13Q5VXD3 122 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RPL22L1Q6P5R6 122 aaKnown RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SPINT4Q6UDR6 99 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF705AQ6ZN79 300 aaPredicted RBP0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 C2orf91Q6ZV80 131 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 LCA10Q71F78 164 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 TCF24Q7RTU0 167 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MSRB3Q8IXL7 192 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RPRMLQ8N4K4 120 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 RNF182Q8N6D2 247 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 Q8NAQ8 132 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 C1orf64Q8NEQ6 169 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 OR13C4Q8NGS5 318 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 OR5J2Q8NH18 312 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CLDND2Q8NHS1 167 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MUC7Q8TAX7 377 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 STAG3L4Q8TBR4 150 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 ZNF675Q8TD23 568 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MBD3L1Q8WWY6 194 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 DNAJC9Q8WXX5 260 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 C11orf40Q8WZ69 217 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 FGF13Q92913 245 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 HIST1H2BHQ93079 126 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 PLEKHB2Q96CS7 222 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 MALSU1Q96EH3 234 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 DNAJC30Q96LL9 226 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 C2orf50Q96LR7 162 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 CARD19Q96LW7 228 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 IMMP2LQ96T52 175 aa0.68□□□□□ -2.3
TRAJ3-201ENST00000390534 SERPINI1Q99574 410 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms