RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 NPCDR1Q9BY65 106 aa17.62■□□□□ 0.41
SKI-201ENST00000378536 METRNQ9UJH8 293 aa17.62■□□□□ 0.41
SKI-201ENST00000378536 WDR25Q64LD2 544 aaPredicted RBP17.61■□□□□ 0.41
SKI-201ENST00000378536 HEPN1Q6WQI6 88 aa17.61■□□□□ 0.41
SKI-201ENST00000378536 TECTAO75443 2155 aa17.61■□□□□ 0.41
SKI-201ENST00000378536 NAPSAO96009 420 aa17.61■□□□□ 0.41
SKI-201ENST00000378536 KRTDAPP60985 99 aa17.61■□□□□ 0.41
SKI-201ENST00000378536 IL6RP08887 468 aaPredicted RBP17.61■□□□□ 0.41
SKI-201ENST00000378536 LOC102723971A0A1B0GUV8 181 aa17.61■□□□□ 0.41
SKI-201ENST00000378536 C15orf61A6NNL5 157 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 IGHV3-35A0A0C4DH35 117 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 Q6P435 159 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 ZNF880Q6PDB4 577 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 RNASEH2CQ8TDP1 164 aaKnown RBP17.6■□□□□ 0.41
SKI-201ENST00000378536 GAFA1Q96PS6 74 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 A0A0G2JLM5 398 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 COL6A6A6NMZ7 2263 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 TMSB15BA0A087X1C1 80 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 IGHV3-23P01764 117 aa17.6■□□□□ 0.41
SKI-201ENST00000378536 MRPL54Q6P161 138 aaKnown RBP17.6■□□□□ 0.41
SKI-201ENST00000378536 IGHV2-26A0A0B4J1V2 119 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 IGHV1-8P0DP01 117 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 HOXA4Q00056 320 aaPredicted RBP17.59■□□□□ 0.41
SKI-201ENST00000378536 CBLN2Q8IUK8 224 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 SLC25A33Q9BSK2 321 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 PLXND1Q9Y4D7 1925 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 NIT2Q9NQR4 276 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 ICE1Q9Y2F5 2266 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 C21orf62Q9NYP8 219 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 FAM215AQ9Y5M1 114 aa17.59■□□□□ 0.41
SKI-201ENST00000378536 MFSD2BA6NFX1 497 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 M0QZK8 103 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 F12P00748 615 aaPredicted RBP17.58■□□□□ 0.41
SKI-201ENST00000378536 LINC00305Q7Z4B0 112 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 SSC4DQ8WTU2 575 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 SRD5A3Q9H8P0 318 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 ARL2-SNX15V9GYD0 113 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 TTC28Q96AY4 2481 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 OR2T8A6NH00 312 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 TIMM23O14925 209 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 DLX6P56179 175 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 DEFA6Q01524 100 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 OR2D3Q8NGH3 330 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 CACNG8Q8WXS5 425 aa17.58■□□□□ 0.41
SKI-201ENST00000378536 EIF3GO75821 320 aaKnown RBP eCLIP17.58■□□□□ 0.4
SKI-201ENST00000378536 WNT10AQ9GZT5 417 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 FOXA2Q9Y261 457 aaPredicted RBP17.58■□□□□ 0.4
SKI-201ENST00000378536 S4R3C0 116 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 TRAV40A0A0B4J280 105 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 LHFPL1Q86WI0 220 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 TEX45Q8NA69 505 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 NHLRC2Q8NBF2 726 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 ZNF418Q8TF45 676 aaPredicted RBP17.58■□□□□ 0.4
SKI-201ENST00000378536 IGKV1D-17A0A075B6S4 117 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 FABP4P15090 132 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 CD24P25063 80 aa17.58■□□□□ 0.4
SKI-201ENST00000378536 ASCL4Q6XD76 172 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 GOLT1BQ9Y3E0 138 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 TRBV6-6A0A0A6YYG2 114 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 IGFBP2P18065 325 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 CACNA1BQ00975 2339 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 FHITP49789 147 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 IGFL2Q6UWQ7 119 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 VMO1Q7Z5L0 202 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 COL8A2P25067 703 aa17.57■□□□□ 0.4
SKI-201ENST00000378536 CGB1A6NKQ9 187 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 TFF3Q07654 80 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 SRSF12Q8WXF0 261 aaKnown RBP17.56■□□□□ 0.4
SKI-201ENST00000378536 TRAV14DV4A0A0A6YYC5 116 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 E9PQ18 207 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 NPFFR1Q9GZQ6 430 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 YTHDF2Q9Y5A9 579 aaKnown RBP17.56■□□□□ 0.4
SKI-201ENST00000378536 SNRNP200O75643 2136 aaKnown RBP17.56■□□□□ 0.4
SKI-201ENST00000378536 TMEM189A5PLL7 270 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 FAM90A9PA6NNJ1 464 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 ISLRO14498 428 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 SIAH2O43255 324 aa17.56■□□□□ 0.4
SKI-201ENST00000378536 NTF4P34130 210 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 RARRES2Q99969 163 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 CEACAM4O75871 244 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 GCHFRP30047 84 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 FUT9Q9Y231 359 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 PHF3Q92576 2039 aaKnown RBP17.55■□□□□ 0.4
SKI-201ENST00000378536 DKK1O94907 266 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 ELOVL1Q9BW60 279 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 MYO7BQ6PIF6 2116 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 H3BTX0 84 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 HSPB7Q9UBY9 170 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 LRRK1Q38SD2 2015 aa17.55■□□□□ 0.4
SKI-201ENST00000378536 LY6G6FQ5SQ64 297 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 SPANXN1Q5VSR9 72 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 RPRMQ9NS64 109 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 CRISP2P16562 243 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 OR4X2Q8NGF9 303 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 COQ2Q96H96 371 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 ZFHX2Q9C0A1 2572 aaPredicted RBP17.54■□□□□ 0.4
SKI-201ENST00000378536 RNF222A6NCQ9 220 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 GPR183P32249 361 aa17.54■□□□□ 0.4
SKI-201ENST00000378536 IBA57Q5T440 356 aaKnown RBP17.54■□□□□ 0.4
SKI-201ENST00000378536 LRTM2Q8N967 370 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms