RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 AREGP15514 252 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-201ENST00000376656 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 PILRBQ9UKJ0 227 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 CA2P00918 260 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 ASPHD1Q5U4P2 390 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
TRIM39-201ENST00000376656 ERVK-16P61578 105 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 PLGLB1Q02325 96 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 UNQ5815/PRO19632Q6UWF5 114 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 GCNT2Q8N0V5 402 aa13.61□□□□□ -0.23
TRIM39-201ENST00000376656 SPINT2O43291 252 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 AMY1AP04745 511 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 OSTCQ9NRP0 149 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 PATE3B3GLJ2 98 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 FAM122AQ96E09 287 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 GNG12Q9UBI6 72 aa13.6□□□□□ -0.23
TRIM39-201ENST00000376656 RPL19P84098 196 aaKnown RBP13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR20EP86478 221 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR20CP86479 221 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR20DP86480 221 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR20BP86481 221 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR20AP86496 221 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 MRPL49Q13405 166 aaKnown RBP13.59□□□□□ -0.23
TRIM39-201ENST00000376656 WDR82Q6UXN9 313 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 KLF14Q8TD94 323 aaPredicted RBP13.59□□□□□ -0.23
TRIM39-201ENST00000376656 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 CA1P00915 261 aaPredicted RBP13.59□□□□□ -0.23
TRIM39-201ENST00000376656 LINC00869P0C866 280 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 NPY1RP25929 384 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 TSPOP30536 169 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 RBX1P62877 108 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 TIGITQ495A1 244 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 ABHD17BQ5VST6 288 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 LINC00696Q6ZRV3 163 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR7Q8TB68 274 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 CLEC7AQ9BXN2 247 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 SERTAD4Q9NUC0 356 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 AHCTF1Q8WYP5 2266 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 IGLV2-8P01709 118 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 ADH4P08319 380 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 ZNF503Q96F45 646 aa13.59□□□□□ -0.23
TRIM39-201ENST00000376656 PRR14LQ5THK1 2151 aa13.58□□□□□ -0.23
TRIM39-201ENST00000376656 ZNF891A8MT65 544 aaPredicted RBP13.58□□□□□ -0.24
TRIM39-201ENST00000376656 J3QW42 95 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 MGST1P10620 155 aaKnown RBP13.58□□□□□ -0.24
TRIM39-201ENST00000376656 MYOD1P15172 320 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 MORN2Q502X0 79 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 ANKRD39Q53RE8 183 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 CD177Q8N6Q3 437 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 SLC24A4Q8NFF2 622 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 BORCS7Q96B45 105 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 COL6A3P12111 3177 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 TNFSF15O95150 251 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 SLAQ13239 276 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 IBA57Q5T440 356 aaKnown RBP13.58□□□□□ -0.24
TRIM39-201ENST00000376656 LEMD1Q68G75 181 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 C6orf15Q6UXA7 325 aaPredicted RBP13.58□□□□□ -0.24
TRIM39-201ENST00000376656 C1orf229Q6ZS94 237 aaPredicted RBP13.58□□□□□ -0.24
TRIM39-201ENST00000376656 FAM214BQ7L5A3 538 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 KLHDC1Q8N7A1 406 aa13.58□□□□□ -0.24
TRIM39-201ENST00000376656 NKX6-3A6NJ46 265 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 APCSP02743 223 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 REG1AP05451 166 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 ZNF134P52741 427 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 RAB31Q13636 194 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 S1PR3Q99500 378 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 GCM1Q9NP62 436 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 SLC35D1Q9NTN3 355 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 FZR1Q9UM11 496 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 TRGV8A0A0C4DH27 118 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 ISLRO14498 428 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 PMS2CLQ68D20 193 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 NHLRC2Q8NBF2 726 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 GATA2P23769 480 aaPredicted RBP13.57□□□□□ -0.24
TRIM39-201ENST00000376656 COX19Q49B96 90 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 UTF1Q5T230 341 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 STUMQ69YW2 141 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 FAM168AQ92567 244 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
TRIM39-201ENST00000376656 LYZL6O75951 148 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 USF1P22415 310 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-201ENST00000376656 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-201ENST00000376656 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 OR7C2O60412 319 aa13.56□□□□□ -0.24
TRIM39-201ENST00000376656 KLF3P57682 345 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-201ENST00000376656 FAM90A1Q86YD7 464 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms