RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ARFGEF3Q5TH69 2177 aa11.44□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PPE2 198 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 INS-IGF2F8WCM5 200 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 MC5RP33032 325 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 PPOXP50336 477 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 UTF1Q5T230 341 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 CYP2G1PQ6ZSU1 146 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 Q8N7P7 452 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 ISOC2Q96AB3 205 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
USF1-202ENST00000368020 HARBI1Q96MB7 349 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 SDF2L1Q9HCN8 221 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 H0YJW9 148 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 TGOLN2O43493 480 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 PDE6DO43924 150 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 RBP4P02753 201 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 S100A6P06703 90 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 FBP1P09467 338 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 CCL3L1P16619 93 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 IGFBP2P18065 325 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 LOXP28300 417 aaPredicted RBP11.43□□□□□ -0.58
USF1-202ENST00000368020 HNF4GQ14541 408 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
USF1-202ENST00000368020 MUC15Q8N387 334 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 OR1L8Q8NGR8 309 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
USF1-202ENST00000368020 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
USF1-202ENST00000368020 PXMP4Q9Y6I8 212 aa11.43□□□□□ -0.58
USF1-202ENST00000368020 PKDREJQ9NTG1 2253 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PN81 502 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 CXorf1O96002 111 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 MT-CO2P00403 227 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 CA2P00918 260 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
USF1-202ENST00000368020 PLA2G2AP14555 144 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 CHRNA7P36544 502 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 RPL29P47914 159 aaKnown RBP11.42□□□□□ -0.58
USF1-202ENST00000368020 DLX6P56179 175 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 CD81P60033 236 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 WDR25Q64LD2 544 aaPredicted RBP11.42□□□□□ -0.58
USF1-202ENST00000368020 LINC01560Q8TB33 94 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 MGST2Q99735 147 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 COMMD5Q9GZQ3 224 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
USF1-202ENST00000368020 CLDN34H7C241 214 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 J3QKU1 62 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 VENTXO95231 258 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 RPS16P62249 146 aaKnown RBP11.41□□□□□ -0.58
USF1-202ENST00000368020 RPL8P62917 257 aaKnown RBP11.41□□□□□ -0.58
USF1-202ENST00000368020 HABP2Q14520 560 aaPredicted RBP11.41□□□□□ -0.58
USF1-202ENST00000368020 TMEM241Q24JQ0 296 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 ZNF672Q499Z4 452 aaPredicted RBP11.41□□□□□ -0.58
USF1-202ENST00000368020 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 NEUROG1Q92886 237 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 CTSZQ9UBR2 303 aa11.41□□□□□ -0.58
USF1-202ENST00000368020 hCG_1809904A0A1W2PP81 198 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PR64 198 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 A0A1W2PRV1 198 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 F6UZH7 168 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 OPN1MWP04001 364 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 OPN1MW2P0DN77 364 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 OPN1MW3P0DN78 364 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 IGHV1-8P0DP01 117 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 LGALS7P47929 136 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 B2MP61769 119 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 RHOBP62745 196 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 ERHP84090 104 aaKnown RBP11.4□□□□□ -0.58
USF1-202ENST00000368020 SRSF1Q07955 248 aaKnown RBP eCLIP11.4□□□□□ -0.58
USF1-202ENST00000368020 BSXQ3C1V8 233 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 TGIF2LXQ8IUE1 241 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 OR4F5Q8NH21 305 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 OR4F4Q96R69 305 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 TMEM204Q9BSN7 226 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 RND2P52198 227 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 PRRX1P54821 245 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
USF1-202ENST00000368020 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 ST6GALNAC6Q969X2 333 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 SLC35E1Q96K37 410 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 NABP2Q9BQ15 211 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 HINT2Q9BX68 163 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
USF1-202ENST00000368020 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
USF1-202ENST00000368020 FCN3O75636 299 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms