RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 A0A087X0M5 115 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 PPIAL4CA0A0B4J2A2 164 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 A0A1B0GX30 115 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 COLCA2A8K830 154 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 C22orf46C9J442 243 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 TNFRSF13BO14836 293 aaPredicted RBP14.33□□□□□ -0.12
NPAS3-202ENST00000356141 PPIAL4GP0DN37 164 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 MMP9P14780 707 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 THBS3P49746 956 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 SPSB3Q6PJ21 355 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 OR51B2Q9Y5P1 312 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 Q5PR19 223 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 C11orf42Q8N5U0 333 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 GATAD1Q8WUU5 269 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 CORO2AQ92828 525 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
NPAS3-202ENST00000356141 HILPDAQ9Y5L2 63 aa14.33□□□□□ -0.12
NPAS3-202ENST00000356141 SLC25A17O43808 307 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 RAB1BQ9H0U4 201 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 PUS1Q9Y606 427 aaKnown RBP eCLIP14.32□□□□□ -0.12
NPAS3-202ENST00000356141 USP9YO00507 2555 aaPredicted RBP14.32□□□□□ -0.12
NPAS3-202ENST00000356141 ZANQ9Y493 2812 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 IGHV3-21A0A0B4J1V1 117 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 LRRC75BQ2VPJ9 315 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 TMEM155Q4W5P6 130 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 ETFRF1Q6IPR1 90 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 GNPNAT1Q96EK6 184 aaPredicted RBP14.32□□□□□ -0.12
NPAS3-202ENST00000356141 DOPEY1Q5JWR5 2465 aa14.32□□□□□ -0.12
NPAS3-202ENST00000356141 PMS2P5A8MQ11 134 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 M0R036 132 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
NPAS3-202ENST00000356141 DDTP30046 118 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 GNB1P62873 340 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 RTL8BQ17RB0 113 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 ZNF841Q6ZN19 808 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 CBLN4Q9NTU7 201 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 DVL1P1P54792 670 aaPredicted RBP14.31□□□□□ -0.12
NPAS3-202ENST00000356141 HIPK2Q9H2X6 1198 aa14.31□□□□□ -0.12
NPAS3-202ENST00000356141 H0YJW9 148 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 CA2P00918 260 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 GATA2P23769 480 aaPredicted RBP14.3□□□□□ -0.12
NPAS3-202ENST00000356141 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
NPAS3-202ENST00000356141 FFAR4Q5NUL3 377 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 NRGNQ92686 78 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 RCC1LQ96I51 464 aaKnown RBP14.3□□□□□ -0.12
NPAS3-202ENST00000356141 SNRPCP09234 159 aaKnown RBP14.3□□□□□ -0.12
NPAS3-202ENST00000356141 KIAA0141Q14154 515 aaPredicted RBP14.3□□□□□ -0.12
NPAS3-202ENST00000356141 TMEM204Q9BSN7 226 aa14.3□□□□□ -0.12
NPAS3-202ENST00000356141 C15orf61A6NNL5 157 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 YIF1AO95070 293 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 GNB2P62879 340 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
NPAS3-202ENST00000356141 RPP25LQ8N5L8 163 aaKnown RBP14.29□□□□□ -0.12
NPAS3-202ENST00000356141 PINX1Q96BK5 328 aaKnown RBP14.29□□□□□ -0.12
NPAS3-202ENST00000356141 RAB9BQ9NP90 201 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 ENY2Q9NPA8 101 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 HSBP1L1C9JCN9 74 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 FAM90A26D6RGX4 464 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 CD5P06127 495 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 DLX6P56179 175 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 LCN2P80188 198 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 UQCC3Q6UW78 93 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 ISOC2Q96AB3 205 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 C2orf88Q9BSF0 95 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 TMEM133Q9H2Q1 129 aa14.29□□□□□ -0.12
NPAS3-202ENST00000356141 FBN2P35556 2912 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 IGHV2-26A0A0B4J1V2 119 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 APOA2P02652 100 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 ZNF787Q6DD87 383 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 LHFPL4Q7Z7J7 247 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 FLYWCH2Q96CP2 140 aaKnown RBP14.28□□□□□ -0.12
NPAS3-202ENST00000356141 UMAD1C9J7I0 102 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 LDLRAD2Q5SZI1 272 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 MIC13Q5XKP0 118 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 OR8B3Q8NGG8 313 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 BBC3Q96PG8 261 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-202ENST00000356141 OR8B2Q96RD0 313 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 SCRT1Q9BWW7 348 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 NPCDR1Q9BY65 106 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 RBFOX3A6NFN3 312 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 HRASP01112 189 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 BMI1P35226 326 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 VDAC2P45880 294 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-202ENST00000356141 SSX8Q7RTT4 187 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 LHX4Q969G2 390 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 NABP2Q9BQ15 211 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 TMEM147Q9BVK8 224 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
NPAS3-202ENST00000356141 HELZ2Q9BYK8 2649 aaKnown RBP14.28□□□□□ -0.12
NPAS3-202ENST00000356141 A1L4Q6 167 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 FAM157AC9JC47 383 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 RAB4AP20338 218 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 CD1BP29016 333 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 ZNF833PQ6ZTB9 187 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 RPS10P5Q9NQ39 176 aa14.27□□□□□ -0.12
NPAS3-202ENST00000356141 TEX50A0A1B0GTY4 177 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 UBE2G2P60604 165 aa14.27□□□□□ -0.13
NPAS3-202ENST00000356141 NUTF2P61970 127 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms