RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 TMEM167AQ8TBQ9 72 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 CBLN4Q9NTU7 201 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 ROS1P08922 2347 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 A0A1W2PPV4 95 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 HMGB3O15347 200 aaKnown RBP13.56□□□□□ -0.24
SAMM50-201ENST00000350028 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
SAMM50-201ENST00000350028 RBP4P02753 201 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 PRRX1P54821 245 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
SAMM50-201ENST00000350028 ARSJQ5FYB0 599 aaPredicted RBP13.56□□□□□ -0.24
SAMM50-201ENST00000350028 TEPPQ6URK8 271 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 OR1L8Q8NGR8 309 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 TMPRSS5Q9H3S3 457 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 PXMP4Q9Y6I8 212 aa13.56□□□□□ -0.24
SAMM50-201ENST00000350028 A0A1W2PPE2 198 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 INS-IGF2F8WCM5 200 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 YIF1AO95070 293 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 OR2C1O95371 312 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 MAS1LP35410 378 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
SAMM50-201ENST00000350028 C8orf46Q8TAG6 207 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 SIRT7Q9NRC8 400 aa13.55□□□□□ -0.24
SAMM50-201ENST00000350028 KMT2BQ9UMN6 2715 aaPredicted RBP13.54□□□□□ -0.24
SAMM50-201ENST00000350028 TMEM250H0YL14 139 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 CTRB1P17538 263 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 CD81P60033 236 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 DIAPH2-AS1Q14236 149 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 BSXQ3C1V8 233 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 SMUG1Q53HV7 270 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 CTRB2Q6GPI1 263 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
SAMM50-201ENST00000350028 ISOC2Q96AB3 205 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
SAMM50-201ENST00000350028 A0A1W2PN81 502 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 OPN1MWP04001 364 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 OPN1MW2P0DN77 364 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 OPN1MW3P0DN78 364 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 CHRNA7P36544 502 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 RPL29P47914 159 aaKnown RBP13.53□□□□□ -0.24
SAMM50-201ENST00000350028 LGALS7P47929 136 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 ERHP84090 104 aaKnown RBP13.53□□□□□ -0.24
SAMM50-201ENST00000350028 VMA21Q3ZAQ7 101 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 SDF2L1Q9HCN8 221 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 COL6A6A6NMZ7 2263 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 PKDREJQ9NTG1 2253 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 NBASA2RRP1 2371 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 IGHV2-26A0A0B4J1V2 119 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 PPIAL4CA0A0B4J2A2 164 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 CXorf65A6NEN9 183 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 C1orf196B1AJZ1 125 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 PPIAL4GP0DN37 164 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 RNASE2P10153 161 aaKnown RBP13.53□□□□□ -0.24
SAMM50-201ENST00000350028 C11orf71Q6IPW1 123 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 TMEM144Q7Z5S9 345 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 TIMD4Q96H15 378 aa13.53□□□□□ -0.24
SAMM50-201ENST00000350028 hCG_1809904A0A1W2PP81 198 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 A0A1W2PR64 198 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 A0A1W2PRV1 198 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 IGLV2-23P01705 113 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 RAB5BP61020 215 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 B2MP61769 119 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 HLA-DRB5Q30154 266 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 GCSAMLQ5JQS6 135 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.25
SAMM50-201ENST00000350028 IQCF2Q8IXL9 164 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 FAM24BQ8N5W8 94 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 BEND2Q8NDZ0 799 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 YPEL4Q96NS1 127 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 CLEC7AQ9BXN2 247 aa13.52□□□□□ -0.25
SAMM50-201ENST00000350028 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.25
SAMM50-201ENST00000350028 PAGE4O60829 102 aa13.51□□□□□ -0.25
SAMM50-201ENST00000350028 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
SAMM50-201ENST00000350028 RAB5AP20339 215 aa13.51□□□□□ -0.25
SAMM50-201ENST00000350028 MALSU1Q96EH3 234 aa13.51□□□□□ -0.25
SAMM50-201ENST00000350028 NAT8Q9UHE5 227 aa13.51□□□□□ -0.25
SAMM50-201ENST00000350028 STAG3L2P0CL84 134 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 STAG3L3P0CL85 134 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 LY6G5BQ8NDX9 201 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 OR4F5Q8NH21 305 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 GATAD1Q8WUU5 269 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 SSMEM1Q8WWF3 244 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
SAMM50-201ENST00000350028 OR4F4Q96R69 305 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 BIN3Q9NQY0 253 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 CXorf1O96002 111 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 DEFA4P12838 97 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 IGFBP2P18065 325 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 GPX4P36969 197 aaPredicted RBP13.5□□□□□ -0.25
SAMM50-201ENST00000350028 RHOBP62745 196 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 PRR20EP86478 221 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 PRR20CP86479 221 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 PRR20DP86480 221 aa13.5□□□□□ -0.25
SAMM50-201ENST00000350028 PRR20BP86481 221 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms