RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CLDND2Q8NHS1 167 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 AMMECR1Q9Y4X0 333 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 SFTA3P0C7M3 94 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 PRTN3P24158 256 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 SRSF1Q07955 248 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 LCN15Q6UWW0 184 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 VSTM2AQ8TAG5 236 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 RARRES2Q99969 163 aa18.07■□□□□ 0.48
PDLIM2-203ENST00000339162 UBR5O95071 2799 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 MDKP21741 143 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 GUCA2BQ16661 112 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 VMA21Q3ZAQ7 101 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 VMO1Q7Z5L0 202 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 IQCF2Q8IXL9 164 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 OR11H6Q8NGC7 330 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 MAP1AP78559 2803 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 HTR1DP28221 377 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 PPT1P50897 306 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 FGF8P55075 233 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 FAM122CQ6P4D5 195 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 TREML4Q6UXN2 200 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 NDUFA4L2Q9NRX3 87 aa18.06■□□□□ 0.48
PDLIM2-203ENST00000339162 A0A1W2PPI3 338 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 FAM157AC9JC47 383 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 DEFA4P12838 97 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 LMO4P61968 165 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 TMEM41BQ5BJD5 291 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 DPPA3Q6W0C5 159 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 COMMD1Q8N668 190 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 RCC1LQ96I51 464 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 LPAR2Q9HBW0 351 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 WDR83OSQ9Y284 106 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 TIMM9Q9Y5J7 89 aa18.05■□□□□ 0.48
PDLIM2-203ENST00000339162 A1L4Q6 167 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 CGB1A6NKQ9 187 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 LGALS7P47929 136 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 MRGPRG-AS1Q2M3A8 158 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 ARSJQ5FYB0 599 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 FFAR4Q5NUL3 377 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 TPTE2P1Q5T6R2 138 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 CENPVQ7Z7K6 275 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 RPP25LQ8N5L8 163 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 ZNF709Q8N972 641 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 OR1L8Q8NGR8 309 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 NRGNQ92686 78 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 KLF2Q9Y5W3 355 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 A0A1B0GW64 132 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 TIMM23O14925 209 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 HMGB3O15347 200 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 CD24P25063 80 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 HAGHQ16775 308 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 DPM3Q9P2X0 92 aa18.04■□□□□ 0.48
PDLIM2-203ENST00000339162 SP5Q6BEB4 398 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 LFNGQ8NES3 379 aa18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 OR4A5Q8NH83 315 aa18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 SPOCK3Q9BQ16 436 aa18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 CSMD2Q7Z408 3487 aa18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 PAX2Q02962 417 aa18.03■□□□□ 0.48
PDLIM2-203ENST00000339162 CSMD1Q96PZ7 3565 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 DLK1P80370 383 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 WT1-ASQ06250 92 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 PSG5Q15238 335 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 MLANAQ16655 118 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 C1orf159Q96HA4 380 aa18.02■□□□□ 0.48
PDLIM2-203ENST00000339162 NAV3Q8IVL0 2385 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 ODF3BA8MYP8 253 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 SCAF4O95104 1147 aaKnown RBP18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 APELAP0DMC3 54 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 PDLIM4P50479 330 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 PEA15Q15121 130 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 GCSAMLQ5JQS6 135 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 PBDC1Q9BVG4 233 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 GGACTQ9BVM4 153 aa18.02■□□□□ 0.47
PDLIM2-203ENST00000339162 RNASE2P10153 161 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 SSX2Q16385 188 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 C10orf91Q5T1B1 145 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 OR10G4Q8NGN3 311 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 OR10G9Q8NGN4 311 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 OR10G7Q8NGN6 311 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 MGST2Q99735 147 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 SEC11CQ9BY50 192 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 SLC25A22Q9H936 323 aa18.01■□□□□ 0.47
PDLIM2-203ENST00000339162 RBFOX3A6NFN3 312 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 REG1AP05451 166 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 HOXB4P17483 251 aaPredicted RBP18■□□□□ 0.47
PDLIM2-203ENST00000339162 ZNF787Q6DD87 383 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 FBXL15Q9H469 300 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 KIAA1456Q9P272 454 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 METTL1Q9UBP6 276 aaKnown RBP18■□□□□ 0.47
PDLIM2-203ENST00000339162 CELSR2Q9HCU4 2923 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 IGHV2-70DA0A0C4DH43 119 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 C17orf112F2Z3M2 114 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 GNB1P62873 340 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 TNXAQ16473 311 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 SIRPDQ9H106 197 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 NPVFQ9HCQ7 196 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 SIGLEC9Q9Y336 463 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 KPTNQ9Y664 436 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 CENPEQ02224 2701 aa18■□□□□ 0.47
PDLIM2-203ENST00000339162 BTBD17A6NE02 478 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms