RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DEFB108BQ8NET1 73 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 WFDC12Q8WWY7 111 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 SPRY4Q9C004 299 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 THBS3P49746 956 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 PDLIM4P50479 330 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 RANP62826 216 aaKnown RBP13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 S1PR3Q99500 378 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 ENY2Q9NPA8 101 aa13.73□□□□□ -0.21
CDC42EP4-201ENST00000335793 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 KITLGP21583 273 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 ZNRF1Q8ND25 227 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 OR5AU1Q8NGC0 362 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 HYPMO75409 117 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 PMCHP20382 165 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 BMI1P35226 326 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 BRWD1-AS2P59051 145 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 TPPP2P59282 170 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 ZDHHC11Q9H8X9 412 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 PCNX1Q96RV3 2341 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 PCSK5Q92824 1860 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 NKX2-8O15522 239 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 ACTL6BO94805 426 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 ACSF3Q4G176 576 aaPredicted RBP13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 BET1LQ9NYM9 111 aa13.72□□□□□ -0.21
CDC42EP4-201ENST00000335793 IGHV2OR16-5A0A0B4J2B6 119 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 RRHO14718 337 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 CECR9P0C854 216 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 ARL14EPLP0DKL9 152 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 TEX43Q6ZNM6 134 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 Q6ZT83 130 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 LINC01551Q86U37 167 aa13.71□□□□□ -0.21
CDC42EP4-201ENST00000335793 M0R296 226 aa13.71□□□□□ -0.22
CDC42EP4-201ENST00000335793 IL3RAP26951 378 aa13.71□□□□□ -0.22
CDC42EP4-201ENST00000335793 ADMP35318 185 aa13.71□□□□□ -0.22
CDC42EP4-201ENST00000335793 PPP1R35Q8TAP8 253 aa13.71□□□□□ -0.22
CDC42EP4-201ENST00000335793 SPRY3O43610 288 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 SPINK4O60575 86 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 AGMATQ9BSE5 352 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 PXMP4Q9Y6I8 212 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 PKDREJQ9NTG1 2253 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 IGHV2-70DA0A0C4DH43 119 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 C15orf62A8K5M9 175 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 TNFSF4P23510 183 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 GNB1P62873 340 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 CLEC5AQ9NY25 188 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 POLEQ07864 2286 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 TRAV3A0A0B4J244 114 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 NPPCP23582 126 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 ZNF83P51522 516 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 FAM201AQ5SY85 155 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 C11orf53Q8IXP5 236 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 UQCR10Q9UDW1 63 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 TNCP24821 2201 aa13.7□□□□□ -0.22
CDC42EP4-201ENST00000335793 PMS2P5A8MQ11 134 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 C22orf46C9J442 243 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 CBLN1P23435 193 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 ZNF90Q03938 601 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 TGIF2LYQ8IUE0 185 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 TNFRSF14Q92956 283 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 GCM1Q9NP62 436 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 PDE6DO43924 150 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 ADH4P08319 380 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 WNT2P09544 360 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 CD59P13987 128 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 CD177Q8N6Q3 437 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
CDC42EP4-201ENST00000335793 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 DUTP33316 252 aaKnown RBP13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 SRSF6Q13247 344 aaKnown RBP13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 FBXL7Q9UJT9 491 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 ABCA1O95477 2261 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 OR2T8A6NH00 312 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 NTF3P20783 257 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 MOGAT3Q86VF5 341 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 CISD2Q8N5K1 135 aaKnown RBP13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 C9orf106Q8NAJ2 232 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 FDCSPQ8NFU4 85 aa13.68□□□□□ -0.22
CDC42EP4-201ENST00000335793 SCO2A0A1W2PP80 73 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 SRP14P37108 136 aaKnown RBP13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 RAB31Q13636 194 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 LCN12Q6JVE5 192 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 CENPVQ7Z7K6 275 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 ZNF114Q8NC26 417 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 TMEM140Q9NV12 185 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 M0R1B8 84 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 BOD1L1Q8NFC6 3051 aa13.67□□□□□ -0.22
CDC42EP4-201ENST00000335793 K7ERU9 68 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 VENTXO95231 258 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 NHLH1Q02575 133 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 TREML4Q6UXN2 200 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 OR4P4Q8NGL7 312 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 IGLC2P0DOY2 106 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 IGLC3P0DOY3 106 aa13.66□□□□□ -0.22
CDC42EP4-201ENST00000335793 CRISP2P16562 243 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms