RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OCIAD2Q56VL3 154 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 GDF15Q99988 308 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV1OR15-9A0A0B4J2B8 117 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IGKCP01834 107 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 UBE2V1Q13404 147 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 C1orf194Q5T5A4 169 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 ZNF562Q6V9R5 426 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 C1orf122Q6ZSJ8 110 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 GTF3AQ92664 365 aaKnown RBP8.32□□□□□ -1.08
COL4A6-201ENST00000334504 KBTBD11-OT1A0A1B0GTJ5 212 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 FOXS1O43638 330 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 NPPCP23582 126 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 RPL39P5Q59GN2 51 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 LHX8Q68G74 356 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 LOXL4Q96JB6 756 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 RNF126Q9BV68 326 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 CXCL10P02778 98 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 CLEC2AQ6UVW9 174 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 ZNF525Q8N782 197 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IFI27L2Q9H2X8 130 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 ZNFX1Q9P2E3 1918 aaKnown RBP8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3OR16-13A0A075B7E8 117 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-74A0A0B4J1X5 117 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 HBDP02042 147 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 STARD6P59095 220 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 GNG5P63218 68 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 SLC25A28Q96A46 364 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 TTTY12Q9BZ98 90 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 GZMBP10144 247 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 FOXL2P58012 376 aa8.32□□□□□ -1.08
COL4A6-201ENST00000334504 DICER1Q9UPY3 1922 aaKnown RBP8.32□□□□□ -1.08
COL4A6-201ENST00000334504 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
COL4A6-201ENST00000334504 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 BTCP35070 178 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 ERVK11-1P61568 191 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
COL4A6-201ENST00000334504 LY6EQ16553 131 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 NCOR1P1Q9H4R4 102 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 CRIM1Q9NZV1 1036 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 CRYBA2P53672 197 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 DCAF10Q5QP82 559 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 PNKDQ8N490 385 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 TMEM186Q96B77 213 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 A0A0G2JK05 382 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 H7C1H1 209 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 ATXN8Q156A1 80 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 Q9H3A6 140 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 RREB1Q92766 1687 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 CCL4P13236 92 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 RAB9AP51151 201 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 Q6AWC8 147 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 OR52E5Q8NH55 327 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 GNB1LQ9BYB4 327 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 ALS2Q96Q42 1657 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 FAM106AQ4KMX7 169 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 S4R3C0 116 aa8.31□□□□□ -1.08
COL4A6-201ENST00000334504 C16orf97H3BN30 126 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 EEF1AKMT3Q96AZ1 226 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 FGF16O43320 207 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 LINC01590Q5TEZ4 76 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
COL4A6-201ENST00000334504 PLSCR4Q9NRQ2 329 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 NPIPB11E5RHQ5 1161 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 GATA2P23769 480 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-201ENST00000334504 DIRC2Q96SL1 478 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 RSPO3Q9BXY4 272 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-201ENST00000334504 MS4A6AQ9H2W1 248 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 MYO7AQ13402 2215 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 F8VVB4 439 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 F8VWA3 439 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 TDGF1P3P51864 188 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 TMPRSS3P57727 454 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 CCL20P78556 96 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 TMEM74BQ9NUR3 256 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 FAM71F2Q6NXP2 309 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 C1QL2Q7Z5L3 287 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 CIARTQ8N365 385 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-201ENST00000334504 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 CCL19Q99731 98 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 COX11Q9Y6N1 276 aa8.3□□□□□ -1.08
COL4A6-201ENST00000334504 DOCK1Q14185 1865 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 IGHV3-49A0A0A0MS15 119 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 RNASE4P34096 147 aaKnown RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
COL4A6-201ENST00000334504 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 EVI2AP22794 236 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 TSPAN7P41732 249 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 FOXL1Q12952 345 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 C1orf174Q8IYL3 243 aa8.29□□□□□ -1.08
COL4A6-201ENST00000334504 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms