RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 OR51B2Q9Y5P1 312 aa14.22□□□□□ -0.13
DDX28-201ENST00000332395 B4DEV8 164 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 CD3EP07766 207 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 IL6RP08887 468 aaPredicted RBP14.21□□□□□ -0.13
DDX28-201ENST00000332395 MYOD1P15172 320 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 DDTP30046 118 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 APOBEC3AP31941 199 aaPredicted RBP14.21□□□□□ -0.13
DDX28-201ENST00000332395 CASP6P55212 293 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 MANBALQ9NQG1 85 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 CTSZQ9UBR2 303 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 PRNDQ9UKY0 176 aa14.21□□□□□ -0.13
DDX28-201ENST00000332395 SRRM4A7MD48 611 aaKnown RBP14.2□□□□□ -0.14
DDX28-201ENST00000332395 SOX15O60248 233 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 NPY1RP25929 384 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 NHLH1Q02575 133 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 GCSAMLQ5JQS6 135 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 MGST2Q99735 147 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 UPK2O00526 184 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 DVL1O14640 695 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 TGOLN2O43493 480 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 OPRK1P41145 380 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 CA7P43166 264 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 EFNB3Q15768 340 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 WDR25Q64LD2 544 aaPredicted RBP14.2□□□□□ -0.14
DDX28-201ENST00000332395 GATAD1Q8WUU5 269 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 FRZBQ92765 325 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 HINT2Q9BX68 163 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 MRPL20Q9BYC9 149 aaKnown RBP14.2□□□□□ -0.14
DDX28-201ENST00000332395 SDF2L1Q9HCN8 221 aa14.2□□□□□ -0.14
DDX28-201ENST00000332395 B9A039 149 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 TSTD3H0UI37 97 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 FABP4P15090 132 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 FAM210BQ96KR6 192 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 GGTLC1Q9BX51 225 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 KAAG1Q9UBP8 84 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 ZNF257Q9Y2Q1 563 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 POLEQ07864 2286 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 IGHV1-69-2A0A0G2JMI3 117 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 FAM90A27PA6NNH2 459 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 CA2P00918 260 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 PAX1P15863 534 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 LOXP28300 417 aaPredicted RBP14.19□□□□□ -0.14
DDX28-201ENST00000332395 RND2P52198 227 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 TAS2R60P59551 318 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 UNQ6494/PRO21346Q6UXR6 183 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 LINC01560Q8TB33 94 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 NPVFQ9HCQ7 196 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 LSM4Q9Y4Z0 139 aaKnown RBP14.19□□□□□ -0.14
DDX28-201ENST00000332395 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
DDX28-201ENST00000332395 A0A087X0M5 115 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 A0A1B0GX30 115 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 TMEM250H0YL14 139 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 J3QR06 171 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 PLAUP00749 431 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 ARSJQ5FYB0 599 aaPredicted RBP14.18□□□□□ -0.14
DDX28-201ENST00000332395 OR5R1Q8NH85 324 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 RAB1CQ92928 201 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 SMIM7Q9BQ49 75 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 PLEKHA3Q9HB20 300 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 BET1LQ9NYM9 111 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 PXMP4Q9Y6I8 212 aa14.18□□□□□ -0.14
DDX28-201ENST00000332395 KBTBD11O94819 623 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 APOA2P02652 100 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 SAA1P0DJI8 122 aaPredicted RBP14.17□□□□□ -0.14
DDX28-201ENST00000332395 PRCDQ00LT1 54 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OSR1Q8TAX0 266 aaPredicted RBP14.17□□□□□ -0.14
DDX28-201ENST00000332395 C1orf159Q96HA4 380 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 PRO1933Q9H354 126 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 PATZ1Q9HBE1 687 aaKnown RBP14.17□□□□□ -0.14
DDX28-201ENST00000332395 TMEM242Q9NWH2 141 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 A0A1W2PPV4 95 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 H0YJW9 148 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 PHOX2AO14813 284 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 PAGE4O60829 102 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OPN1MWP04001 364 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OPN1MW2P0DN77 364 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OPN1MW3P0DN78 364 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 FBXL19-AS1Q494R0 122 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 MIC13Q5XKP0 118 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OR10X1Q8NGY0 326 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 OR4F5Q8NH21 305 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 PACRGQ96M98 296 aaPredicted RBP14.17□□□□□ -0.14
DDX28-201ENST00000332395 OR4F4Q96R69 305 aa14.17□□□□□ -0.14
DDX28-201ENST00000332395 IGF2RP11717 2491 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 GRNP28799 593 aaKnown RBP14.16□□□□□ -0.14
DDX28-201ENST00000332395 CHRNB4P30926 498 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 REG1BP48304 166 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 OR5AN1Q8NGI8 311 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 RPUSD4Q96CM3 377 aaKnown RBP14.16□□□□□ -0.14
DDX28-201ENST00000332395 HARBI1Q96MB7 349 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 NAT8Q9UHE5 227 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 TEX50A0A1B0GTY4 177 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 CCL21O00585 134 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 DLX6P56179 175 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 KLRB1Q12918 225 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 TMEM249Q2WGJ8 235 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 TEPPQ6URK8 271 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 CYP2G1PQ6ZSU1 146 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 C8orf31Q8N9H6 132 aa14.16□□□□□ -0.14
DDX28-201ENST00000332395 ZNF596Q8TC21 504 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms