RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 OR51H1Q8NH63 302 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 GIMAP1Q8WWP7 306 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 MARC2Q969Z3 335 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 AUNIPQ9H7T9 357 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 TMEM140Q9NV12 185 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
EXOSC4-201ENST00000316052 ETV7Q9Y603 341 aa13□□□□□ -0.33
EXOSC4-201ENST00000316052 S1PR2O95136 353 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 GABARAPO95166 117 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 SCAND1P57086 179 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 EWSR1Q01844 656 aaKnown RBP eCLIP12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 OR1L6Q8NGR2 347 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 FUNDC2Q9BWH2 189 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 QTRT1Q9BXR0 403 aaKnown RBP12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 COMMD5Q9GZQ3 224 aa12.99□□□□□ -0.33
EXOSC4-201ENST00000316052 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 TEX50A0A1B0GTY4 177 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 GNRHRP30968 328 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 MFAP2P55001 183 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 WT1-ASQ06250 92 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 CATR1Q13166 79 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 TMEM17Q86X19 198 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 OR2C3Q8N628 320 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 DMBX1Q8NFW5 382 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 OR5AP2Q8NGF4 316 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 VN1R17PQ8TDU5 208 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 C5orf66Q9H5L9 145 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 PLEKHA2Q9HB19 425 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 UFC1Q9Y3C8 167 aa12.98□□□□□ -0.33
EXOSC4-201ENST00000316052 A0A0A6YYH2 397 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 OR2T8A6NH00 312 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 A6NJ64 397 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 H3BMQ9 156 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 TGOLN2O43493 480 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 SERPINE2P07093 398 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 OR13C7P0DN81 318 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 LINC00476Q8WZB0 136 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 TSC22D3Q99576 134 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 DIABLOQ9NR28 239 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 THYN1Q9P016 225 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 UBQLN2Q9UHD9 624 aa12.97□□□□□ -0.33
EXOSC4-201ENST00000316052 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 A0A0J9YWU9 116 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 FGF2P09038 288 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 TRAPPC2P0DI81 140 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 TRAPPC2BP0DI82 140 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 PMS2P11Q13670 270 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 SLC25A24Q6NUK1 477 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 WFDC3Q8IUB2 231 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 CHRDL1Q9BU40 450 aa12.96□□□□□ -0.33
EXOSC4-201ENST00000316052 TSPAN4O14817 238 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 PGLYRP1O75594 196 aaPredicted RBP12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 RFX2P48378 723 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 CTF1Q16619 201 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 DHRS11Q6UWP2 260 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 SLC38A6Q8IZM9 456 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 OR1L8Q8NGR8 309 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 SPAG8Q99932 426 aaPredicted RBP12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
EXOSC4-201ENST00000316052 IGHV3OR16-8A0A075B7F1 116 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 SPRY2O43597 315 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 CBX5P45973 191 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 DEFB135Q30KP9 77 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 ODF3L2Q3SX64 289 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 Q6ZWC4 215 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 SCARB1Q8WTV0 552 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 FCAMRQ8WWV6 532 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 BSCL2Q96G97 398 aaPredicted RBP12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 NAA50Q9GZZ1 169 aaKnown RBP12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 DAZ1Q9NQZ3 744 aaKnown RBP12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 EHFQ9NZC4 300 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 NSG2Q9Y328 171 aa12.94□□□□□ -0.34
EXOSC4-201ENST00000316052 VPS13DQ5THJ4 4388 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 MARCH11A6NNE9 402 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 XRCC3O43542 346 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 ZNF207O43670 478 aaKnown RBP12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 RLN1P04808 185 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 F2RP25116 425 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 ADMP35318 185 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 LPAR6P43657 344 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 HERV-K104P61576 105 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 THOC7Q6I9Y2 204 aaKnown RBP12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 MOB3AQ96BX8 217 aa12.93□□□□□ -0.34
EXOSC4-201ENST00000316052 ZNF414Q96IQ9 312 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms