RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 HLA-DQA1P01909 254 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 GCSHP23434 173 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 CCL11P51671 97 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 LRRC75BQ2VPJ9 315 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 SPINK9Q5DT21 86 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 DOLPP1Q86YN1 238 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 SPACA3Q8IXA5 215 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 OR10G3Q8NGC4 313 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 SSBP4Q9BWG4 385 aaPredicted RBP9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 KBTBD11-OT1A0A1B0GTJ5 212 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 K7EP34 96 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 WNT2P09544 360 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 FOXA3P55318 350 aaPredicted RBP9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 OR5AS1Q8N127 324 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 OR4F17Q8NGA8 305 aa9.82□□□□□ -0.84
LDLRAD3-201ENST00000315571 IGLV1-36A0A0B4J1U3 117 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 CCDC144NLQ6NUI1 221 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 DKK4Q9UBT3 224 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 APC2O95996 2303 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 HELTA6NFD8 242 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 J3KRW8 73 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 SEC11AP67812 179 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 ID3Q02535 119 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 MYBPHQ13203 477 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 NEUROG1Q92886 237 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 TMEM45BQ96B21 275 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 NPFFR1Q9GZQ6 430 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 TMED7-TICAM2A0A0A6YYA0 188 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 SRSF10O75494 262 aaKnown RBP9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 RPL8P62917 257 aaKnown RBP9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 PSG3Q16557 428 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 SGCBQ16585 318 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 ACSM6Q6P461 480 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 NCOR2Q9Y618 2525 aa9.81□□□□□ -0.84
LDLRAD3-201ENST00000315571 CHEK1O14757 476 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 TUSC2O75896 110 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 CD1BP29016 333 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 CYB561P49447 251 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 LINC00310P59036 64 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 PIGYQ3MUY2 71 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 TRAT1Q6PIZ9 186 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 FAM173AQ9BQD7 235 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 SSBP3Q9BWW4 388 aaPredicted RBP9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 ACACAQ13085 2346 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 MED12LQ86YW9 2145 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 TRBV9A0A0B4J1U6 114 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 EGR4Q05215 589 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 LINC00114Q6XXX2 140 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 TRIB1Q96RU8 372 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 SAP30LQ9HAJ7 183 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 PNRC2Q9NPJ4 139 aaKnown RBP9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 RAXQ9Y2V3 346 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 PLCE1Q9P212 2302 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 PF4V1P10720 104 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 PSG2P11465 335 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 RPL31P62899 125 aaKnown RBP9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 HEYLQ9NQ87 328 aaPredicted RBP9.8□□□□□ -0.84
LDLRAD3-201ENST00000315571 SH2D7A6NKC9 451 aaPredicted RBP9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 IGKV1D-33P01593 117 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 IGKV1-33P01594 117 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 HLA-DRB1P01911 266 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 NMUP48645 174 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 ARL16Q0P5N6 197 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 UBALD1Q8TB05 177 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 CACNG8Q8WXS5 425 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 C5orf30Q96GV9 206 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 RNASE7Q9H1E1 156 aaKnown RBP9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 MRPL16Q9NX20 251 aaKnown RBP9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 FAM206AQ9NX38 181 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 AKAP13Q12802 2813 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 TEX50A0A1B0GTY4 177 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 A0A1B0GWB2 263 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 P04436 131 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 SAMD5Q5TGI4 173 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 ZNF818PQ6ZRF7 136 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 UFC1Q9Y3C8 167 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 A0A1W2PQD3 144 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 ANKRD30BLA7E2S9 258 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 AMY1AP04745 511 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 EBLN2Q6P2I7 272 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 LINC00470Q9BZP3 86 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 SH2D2AQ9NP31 389 aa9.79□□□□□ -0.84
LDLRAD3-201ENST00000315571 TRBV7-9A0A0J9YWB2 115 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 HBZP02008 142 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 FAM87AP0C7U9 286 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 UCNP55089 124 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 COX19Q49B96 90 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 PQLC2Q6ZP29 291 aa9.78□□□□□ -0.84
LDLRAD3-201ENST00000315571 TMEM147Q9BVK8 224 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms