RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 TCEAL7Q9BRU2 100 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 MIOXQ9UGB7 285 aa9.46□□□□□ -0.9
PTPN2-201ENST00000309660 TACC2O95359 2948 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 MALRD1Q5VYJ5 2156 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 AKAP6Q13023 2319 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 IGHV3-72A0A0B4J1Y9 119 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 PPP5D1E7EU14 171 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 GAR1Q9NY12 217 aaKnown RBP9.45□□□□□ -0.9
PTPN2-201ENST00000309660 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
PTPN2-201ENST00000309660 SAA1P0DJI8 122 aaPredicted RBP9.45□□□□□ -0.9
PTPN2-201ENST00000309660 APELAP0DMC3 54 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 FABP4P15090 132 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 MAS1LP35410 378 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 GNB1P62873 340 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 ADTRPQ96IZ2 230 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 NAV3Q8IVL0 2385 aa9.45□□□□□ -0.9
PTPN2-201ENST00000309660 LYNX1G3V0Z9 82 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 NDUFB3O43676 98 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 ENSAO43768 121 aaKnown RBP9.44□□□□□ -0.9
PTPN2-201ENST00000309660 FOXH1O75593 365 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 FABP1P07148 127 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
PTPN2-201ENST00000309660 LYNX1P0DP58 116 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 HOXA5P20719 270 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 OPRK1P41145 380 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 OR10A7Q8NGE5 316 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 ACY3Q96HD9 319 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 COMMD5Q9GZQ3 224 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 MPDU1O75352 247 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 APOA2P02652 100 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 SOD3P08294 240 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 C1QTNF9P0C862 333 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 C10orf55Q5SWW7 151 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM14BQ9NUH8 114 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 SPTAN1Q13813 2472 aaKnown RBP9.44□□□□□ -0.9
PTPN2-201ENST00000309660 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 CDX1P47902 265 aaPredicted RBP9.44□□□□□ -0.9
PTPN2-201ENST00000309660 SLC25A48Q6ZT89 311 aaKnown RBP9.44□□□□□ -0.9
PTPN2-201ENST00000309660 ZNF439Q8NDP4 499 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 LINC00312Q9Y6C7 94 aa9.44□□□□□ -0.9
PTPN2-201ENST00000309660 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 FAM90A9PA6NNJ1 464 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 RND2P52198 227 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 EFNB3Q15768 340 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 ZNF114Q8NC26 417 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 FOXA2Q9Y261 457 aaPredicted RBP9.43□□□□□ -0.9
PTPN2-201ENST00000309660 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 NCOR2Q9Y618 2525 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 IFITM10A6NMD0 228 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 OR7C2O60412 319 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 LRRC10Q5BKY1 277 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
PTPN2-201ENST00000309660 GGACTQ9BVM4 153 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 LRBAP50851 2863 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 BSNQ9UPA5 3926 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 LINC00587B1AMM8 73 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 DVL1O14640 695 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 OR10J4P0C629 311 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 C3orf36Q3SXR2 165 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 LINC01560Q8TB33 94 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 SEBOXQ9HB31 216 aaPredicted RBP9.43□□□□□ -0.9
PTPN2-201ENST00000309660 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 CHD8Q9HCK8 2581 aa9.43□□□□□ -0.9
PTPN2-201ENST00000309660 PRSS46E5RG02 174 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 UPK2O00526 184 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 CXorf1O96002 111 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 OR10J1P30954 320 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 NBL1P41271 181 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 TBR1Q16650 682 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 MIR17HGQ75NE6 70 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 OR9G1Q8NH87 305 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 RNASE6Q93091 150 aaKnown RBP9.42□□□□□ -0.9
PTPN2-201ENST00000309660 ELOVL5Q9NYP7 299 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 FUT9Q9Y231 359 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 SEC14L6B5MCN3 397 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 PDE6DO43924 150 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 REG1AP05451 166 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 RHOBP62745 196 aa9.42□□□□□ -0.9
PTPN2-201ENST00000309660 PSG5Q15238 335 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1008.7 ms