RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 H0Y980 276 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 M0QYG6 137 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 KRASP01116 189 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 HIST1H1BP16401 226 aaKnown RBP14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 G6PCP35575 357 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 CMTM1Q8IZ96 169 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 Q8N402 240 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 ZNF502Q8TBZ5 544 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 SEC22AQ96IW7 307 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 TM2D3Q9BRN9 247 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 PEMTQ9UBM1 199 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 MTFP1Q9UDX5 166 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 CSMD3Q7Z407 3707 aa14.98□□□□□ -0.01
PDZRN3-202ENST00000308537 TMEM213A2RRL7 107 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 CD300EQ496F6 205 aaPredicted RBP14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 RNASE12Q5GAN4 147 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 TBC1D26Q86UD7 250 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 GDPD1Q8N9F7 314 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 ISOC1Q96CN7 298 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 ZNF414Q96IQ9 312 aa14.97□□□□□ -0.01
PDZRN3-202ENST00000308537 A8MWP6 167 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 F8W735 103 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 H3BMQ9 156 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 DHFRP00374 187 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 SERPINE2P07093 398 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 TRAPPC2P0DI81 140 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 TRAPPC2BP0DI82 140 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 ARL3P36405 182 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 TSPAN5P62079 268 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 DEFB114Q30KQ6 69 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 THOC7Q6I9Y2 204 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 OR4D10Q8NGI6 311 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 OR1L8Q8NGR8 309 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 OR2K2Q8NGT1 345 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 DYNC2LI1Q8TCX1 351 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 MRGPRFQ96AM1 343 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 EEF1AKMT3Q96AZ1 226 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 ZC4H2Q9NQZ6 224 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 TMEM14BQ9NUH8 114 aa14.96□□□□□ -0.01
PDZRN3-202ENST00000308537 CTDSP2O14595 271 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 CD74P04233 296 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 CD3DP04234 171 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 OR13C7P0DN81 318 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 FOLR2P14207 255 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 ERVK-16P61578 105 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 MRPS10P82664 201 aaKnown RBP14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 LCN12Q6JVE5 192 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 LPCAT3Q6P1A2 487 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 UNQ9165/PRO28630Q6UXU0 137 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 LAX1Q8IWV1 398 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 SLC38A6Q8IZM9 456 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 CACNG8Q8WXS5 425 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 RCHY1Q96PM5 261 aa14.95□□□□□ -0.02
PDZRN3-202ENST00000308537 TRBV7-1A0A0A6YYK4 115 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 C15orf61A6NNL5 157 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 CLEC3BP05452 202 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 DEFA4P12838 97 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 S100GP29377 79 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 RND3P61587 244 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 CXorf58Q96LI9 332 aa14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 F11RQ9Y624 299 aaKnown RBP14.94□□□□□ -0.02
PDZRN3-202ENST00000308537 STARD9Q9P2P6 4700 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 IFNA6P05013 189 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 P0C879 139 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 LINC00322Q6ZN03 302 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 HSD17B13Q7Z5P4 300 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 ARRDC1Q8N5I2 433 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 LSM10Q969L4 123 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 DIRAS2Q96HU8 199 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 C6orf62Q9GZU0 229 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 OR51B2Q9Y5P1 312 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 CEPT1Q9Y6K0 416 aa14.93□□□□□ -0.02
PDZRN3-202ENST00000308537 K7EIM0 57 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 C8orf88P0DMB2 117 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 PI3P19957 117 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 TBPP20226 339 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 CBLN1P23435 193 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 GPR183P32249 361 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 RNASE10Q5GAN6 216 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 SGPP2Q8IWX5 399 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 OR5B3Q8NH48 314 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 VN1R17PQ8TDU5 208 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 ZNF436Q9C0F3 470 aaPredicted RBP14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 MLXQ9UH92 298 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 PRNDQ9UKY0 176 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 SACSQ9NZJ4 4579 aa14.92□□□□□ -0.02
PDZRN3-202ENST00000308537 ZNF701M0R085 212 aaPredicted RBP14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 CD7P09564 240 aa14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 SSBP1Q04837 148 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 TMEM229BQ8NBD8 167 aa14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 MCFD2Q8NI22 146 aa14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 ZNF486Q96H40 463 aaPredicted RBP14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 TP53RKQ96S44 253 aa14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 RSL24D1Q9UHA3 163 aaKnown RBP14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 SELENOKQ9Y6D0 94 aa14.91□□□□□ -0.02
PDZRN3-202ENST00000308537 GABARAPH6UMI1 98 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 TGOLN2O43493 480 aa14.9□□□□□ -0.02
PDZRN3-202ENST00000308537 IGKV1-5P01602 117 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms