RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KIR3DP1A8MWS1 328 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 SCGB1A1P11684 91 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 TMEM95Q3KNT9 176 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 C2orf91Q6ZV80 131 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 PMCHL2Q9BQD1 86 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 AMY1AP04745 511 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 CRYBB3P26998 211 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
CTDSP1-201ENST00000273062 CDIPTO14735 213 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 GPR183P32249 361 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 HILPDAQ9Y5L2 63 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 HIST1H1AQ02539 215 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 Q0VFX4 171 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 UBALD1Q8TB05 177 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 UCN2Q96RP3 112 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 CHODLQ9H9P2 273 aa13.05□□□□□ -0.32
CTDSP1-201ENST00000273062 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 A0A1W2PPV4 95 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 H0Y8G0 127 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 FOLR3P41439 243 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 HSD52Q0P140 79 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 PSG3Q16557 428 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 CEACAM21Q3KPI0 293 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 OR1A1Q9P1Q5 309 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 ZG16O60844 167 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 SPINK2P20155 84 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 SSR4P51571 173 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 ZNF718Q3SXZ3 478 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 OR2K2Q8NGT1 345 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 RAB37Q96AX2 223 aa13.04□□□□□ -0.32
CTDSP1-201ENST00000273062 ASPMQ8IZT6 3477 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 PCSK5Q92824 1860 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 C9orf118A6NHY6 69 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 F2RL2O00254 374 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 ZIC3O60481 467 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 POM121L2Q96KW2 1035 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 LIFP15018 202 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 CENPWQ5EE01 88 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 Q6ZSR3 168 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 IL1F10Q8WWZ1 152 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 PLEK2Q9NYT0 353 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
CTDSP1-201ENST00000273062 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 APOA2P02652 100 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 HTR1DP28221 377 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 FOXL2NBQ6ZUU3 175 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 BHLHA15Q7RTS1 189 aaPredicted RBP13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 OR10AG1Q8NH19 301 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 FAM168AQ92567 244 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 OXGR1Q96P68 337 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.32
CTDSP1-201ENST00000273062 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 CD24P25063 80 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 VWC2Q2TAL6 325 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 LHFPL2Q6ZUX7 228 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 FGFRL1Q8N441 504 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 ZNF611Q8N823 705 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 OR5A2Q8NGI9 324 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 NEU4Q8WWR8 484 aaPredicted RBP13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 SSBP3Q9BWW4 388 aaPredicted RBP13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 SH2D2AQ9NP31 389 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 OR2W1Q9Y3N9 320 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 CACNA1DQ01668 2161 aa13.02□□□□□ -0.33
CTDSP1-201ENST00000273062 TNFSF11O14788 317 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 GATA3P23771 443 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 SPATA31B1PQ5VZV4 182 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 SHISA2Q6UWI4 295 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 BLNKQ8WV28 456 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 JKAMPQ9P055 326 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 FOXH1O75593 365 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 BCL3P20749 454 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 GJC3Q8NFK1 279 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 ZNF837Q96EG3 531 aaPredicted RBP13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 FRYQ5TBA9 3013 aa13.01□□□□□ -0.33
CTDSP1-201ENST00000273062 CYC1P08574 325 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 Q6ZS49 121 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 YRDCQ86U90 279 aaKnown RBP13□□□□□ -0.33
CTDSP1-201ENST00000273062 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
CTDSP1-201ENST00000273062 HLA-DRB1P01911 266 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 RFPL3SP0C7P2 107 aa13□□□□□ -0.33
CTDSP1-201ENST00000273062 ACP1P24666 158 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms