RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GNG13Q9P2W3 67 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 TNCP24821 2201 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 ACACBO00763 2458 aa13.42□□□□□ -0.26
CCDC40-201ENST00000269318 IGHV3-72A0A0B4J1Y9 119 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 IGHV1-3A0A0C4DH29 117 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 E7EUB6 86 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 GPR6P46095 362 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-201ENST00000269318 LGALS7P47929 136 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 PMS2P11Q13670 270 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 OR10W1Q8NGF6 305 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 ZNF430Q9H8G1 570 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-201ENST00000269318 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 SLC39A9Q9NUM3 307 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 LOC105371242A0A075B767 164 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 CGB1A6NKQ9 187 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 FNDC10F2Z333 226 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 M0R1W7 72 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 SOX15O60248 233 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 EIF3GO75821 320 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC40-201ENST00000269318 BCL2P10415 239 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 OPRK1P41145 380 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 EFNA4P52798 201 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 TMEM88Q6PEY1 159 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 PNKDQ8N490 385 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 RXFP4Q8TDU9 374 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 GGTLC1Q9BX51 225 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 SLC25A22Q9H936 323 aa13.41□□□□□ -0.26
CCDC40-201ENST00000269318 AMMECR1Q9Y4X0 333 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-201ENST00000269318 TSPAN4O14817 238 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 SLC25A17O43808 307 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
CCDC40-201ENST00000269318 ARF6P62330 175 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 VMA21Q3ZAQ7 101 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 CBLN2Q8IUK8 224 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 ACTR3CQ9C0K3 210 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-201ENST00000269318 TPSG1Q9NRR2 321 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 INSIG2Q9Y5U4 225 aa13.4□□□□□ -0.26
CCDC40-201ENST00000269318 ENSAO43768 121 aaKnown RBP13.4□□□□□ -0.27
CCDC40-201ENST00000269318 ACOT6Q3I5F7 207 aaPredicted RBP13.4□□□□□ -0.27
CCDC40-201ENST00000269318 SOHLH1Q5JUK2 328 aa13.4□□□□□ -0.27
CCDC40-201ENST00000269318 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.27
CCDC40-201ENST00000269318 ZFP92A6NM28 416 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 SEC14L6B5MCN3 397 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 OVOL3O00110 214 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 YIF1AO95070 293 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 CRYGBP07316 175 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 FBP1P09467 338 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 HCP5Q6MZN7 132 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 FAM122CQ6P4D5 195 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 RAB24Q969Q5 203 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 RPEQ96AT9 228 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 SIRT7Q9NRC8 400 aa13.39□□□□□ -0.27
CCDC40-201ENST00000269318 A0A1W2PPI3 338 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 DEFA4P12838 97 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 GCSAMLQ5JQS6 135 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 TEPPQ6URK8 271 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 CYB561D1Q8N8Q1 229 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 TEX45Q8NA69 505 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
CCDC40-201ENST00000269318 A0A1W2PN81 502 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 HMGB3O15347 200 aaKnown RBP13.38□□□□□ -0.27
CCDC40-201ENST00000269318 CYB5BO43169 146 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 PRTN3P24158 256 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 CHRNA7P36544 502 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 WT1-ASQ06250 92 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 AWAT1Q58HT5 328 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 PXMP4Q9Y6I8 212 aa13.38□□□□□ -0.27
CCDC40-201ENST00000269318 ODF3BA8MYP8 253 aa13.37□□□□□ -0.27
CCDC40-201ENST00000269318 IGHV2-5P01817 119 aa13.37□□□□□ -0.27
CCDC40-201ENST00000269318 ZFP36P26651 326 aaKnown RBP13.37□□□□□ -0.27
CCDC40-201ENST00000269318 CNTFRP26992 372 aa13.37□□□□□ -0.27
CCDC40-201ENST00000269318 ERHP84090 104 aaKnown RBP13.37□□□□□ -0.27
CCDC40-201ENST00000269318 MIC13Q5XKP0 118 aa13.37□□□□□ -0.27
CCDC40-201ENST00000269318 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
CCDC40-201ENST00000269318 CDC34P49427 236 aaPredicted RBP13.36□□□□□ -0.27
CCDC40-201ENST00000269318 PSG5Q15238 335 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 PRSS8Q16651 343 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 TPTE2P1Q5T6R2 138 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 KIR3DL3Q8N743 410 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 TMPRSS5Q9H3S3 457 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 VAX2Q9UIW0 290 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 USP24Q9UPU5 2620 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 IFNA1P01562 189 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 HTR1DP28221 377 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 P2RX4Q99571 388 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 SIGLEC9Q9Y336 463 aa13.36□□□□□ -0.27
CCDC40-201ENST00000269318 C7orf77A4D0Y5 90 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 GOSR1O95249 250 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 RPL29P47914 159 aaKnown RBP13.35□□□□□ -0.27
CCDC40-201ENST00000269318 PAX2Q02962 417 aa13.35□□□□□ -0.27
CCDC40-201ENST00000269318 CD69Q07108 199 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms