RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 WRBO00258 174 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 DEDDO75618 318 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 CA2P00918 260 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 RLN2P04090 185 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 MYOD1P15172 320 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 VDAC2P45880 294 aaPredicted RBP16.35■□□□□ 0.21
RTCA-201ENST00000260563 SPCS3P61009 180 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 HSPE1P61604 102 aaKnown RBP16.35■□□□□ 0.21
RTCA-201ENST00000260563 PJVKQ0ZLH3 352 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 FOXL1Q12952 345 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 ZFP69Q49AA0 526 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 PDLIM3Q53GG5 364 aaPredicted RBP16.35■□□□□ 0.21
RTCA-201ENST00000260563 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 SLC35E3Q7Z769 313 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 PPP1R14BQ96C90 147 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 HSPB9Q9BQS6 159 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 RBKSQ9H477 322 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 TEX50A0A1B0GTY4 177 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 TMEM89A2RUT3 159 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 H0YIZ8 118 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 FCN1O00602 326 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 SYNGR2O43760 224 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 SSSCA1O60232 199 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 MED6O75586 246 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 IGHG2P01859 326 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 MDKP21741 143 aaPredicted RBP16.35■□□□□ 0.21
RTCA-201ENST00000260563 MAS1LP35410 378 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 TMEM95Q3KNT9 176 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 OR5B3Q8NH48 314 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 LINC01006Q8NI28 216 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 RNF126Q9BV68 326 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 OR5AC2Q9NZP5 309 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 MBD2Q9UBB5 411 aa16.35■□□□□ 0.21
RTCA-201ENST00000260563 A0A1B0GUS0 222 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 ACTL6BO94805 426 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 OPN1MWP04001 364 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 OPN1MW2P0DN77 364 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 OPN1MW3P0DN78 364 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 TNXAQ16473 311 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 SPINK9Q5DT21 86 aa16.34■□□□□ 0.21
RTCA-201ENST00000260563 IGHV7-81A0A0B4J1V7 117 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 CLPSL1A2RUU4 121 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 CEBPZOSA8MTT3 80 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 SLC25A4P12235 298 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 LYL1P12980 280 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 GNB1P62873 340 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 OR11H4Q8NGC9 324 aa16.33■□□□□ 0.2
RTCA-201ENST00000260563 FBN1P35555 2871 aaKnown RBP16.33■□□□□ 0.2
RTCA-201ENST00000260563 TNCP24821 2201 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 BOLA2-SMG1P6H3BVE0 249 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.27e-8■■□□□ 13.1
RTCA-201ENST00000260563 PVALBP20472 110 aaPredicted RBP16.32■□□□□ 0.2
RTCA-201ENST00000260563 COMPP49747 757 aaPredicted RBP16.32■□□□□ 0.2
RTCA-201ENST00000260563 PRCDQ00LT1 54 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 C10orf55Q5SWW7 151 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 NOXA1Q86UR1 476 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 OR1L8Q8NGR8 309 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 DTD1Q8TEA8 209 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 HYLS1Q96M11 299 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 RAB40CQ96S21 281 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 PARP11Q9NR21 331 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 NDUFA4L2Q9NRX3 87 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 RNF114Q9Y508 228 aa16.32■□□□□ 0.2
RTCA-201ENST00000260563 FXYD6-FXYD2A0A087WZ82 144 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 E5RGE8 158 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 L7N2F9 121 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 AP4M1O00189 453 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 IAPPP10997 89 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 RPL27AP46776 148 aaKnown RBP16.31■□□□□ 0.2
RTCA-201ENST00000260563 HOXA1P49639 335 aaPredicted RBP16.31■□□□□ 0.2
RTCA-201ENST00000260563 VAMP2P63027 116 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 CX3CL1P78423 397 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 SSBP2P81877 361 aaPredicted RBP16.31■□□□□ 0.2
RTCA-201ENST00000260563 NDPQ00604 133 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 ZNF562Q6V9R5 426 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 ABHD5Q8WTS1 349 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 DCUN1D4Q92564 292 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 HINT2Q9BX68 163 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 C11orf1Q9H5F2 150 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 SERTAD4Q9NUC0 356 aa16.31■□□□□ 0.2
RTCA-201ENST00000260563 E7EUB6 86 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 ATP6V0E1O15342 81 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 CNIH1O95406 144 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 AWAT1Q58HT5 328 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 ARPC1AQ92747 370 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 PLEKHA3Q9HB20 300 aa16.3■□□□□ 0.2
RTCA-201ENST00000260563 TET2Q6N021 2002 aaPredicted RBP16.3■□□□□ 0.2
RTCA-201ENST00000260563 LINC01548A6NM66 108 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 PAX9P55771 341 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 FXYD3Q14802 87 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 ZNF546Q86UE3 836 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 SRSF12Q8WXF0 261 aaKnown RBP16.29■□□□□ 0.2
RTCA-201ENST00000260563 CIB3Q96Q77 187 aaPredicted RBP16.29■□□□□ 0.2
RTCA-201ENST00000260563 ENY2Q9NPA8 101 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 WSB1Q9Y6I7 421 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 CGB1A6NKQ9 187 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 TMEM50AO95807 157 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 KRTAP21-3Q3LHN1 58 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 TMEM65Q6PI78 240 aa16.29■□□□□ 0.2
RTCA-201ENST00000260563 STPG2Q8N412 459 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms