RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SIGLEC9Q9Y336 463 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 PCP4L1A6NKN8 68 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
SDCBP-201ENST00000260130 PROK1P58294 105 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 Q8N2B8 174 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 M0QZK8 103 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 HAX1O00165 279 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 OR5AC1P0C628 307 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 SPP1P10451 314 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 FOLR2P14207 255 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 H1FOOQ8IZA3 346 aaPredicted RBP13.35□□□□□ -0.27
SDCBP-201ENST00000260130 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 OR8U1Q8NH10 309 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 MOB4Q9Y3A3 225 aa13.35□□□□□ -0.27
SDCBP-201ENST00000260130 MOSP00540 346 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 AMY1AP04745 511 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 IFNA4P05014 189 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 GPR12P47775 334 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 Q6ZS46 218 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 LGI3Q8N145 548 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 Q8N6K4 173 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 WFDC12Q8WWY7 111 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 PROP1O75360 226 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 P2RY1P47900 373 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 RAB5CP51148 216 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 UCP3P55916 312 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 FXYD4P59646 89 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 RAB5BP61020 215 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 CCDC71LQ8N9Z2 235 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 SLC2A9Q9NRM0 540 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 GAB2Q9UQC2 676 aa13.34□□□□□ -0.27
SDCBP-201ENST00000260130 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
SDCBP-201ENST00000260130 COLCA2A8K830 154 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 CT45A6P0DMU7 189 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 CT45A5P0DMU8 189 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 CT45A7P0DMV0 189 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 SNCAP37840 140 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 SP6Q3SY56 376 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 SHISA2Q6UWI4 295 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
SDCBP-201ENST00000260130 C12orf57Q99622 126 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 OR2D2Q9H210 308 aa13.33□□□□□ -0.28
SDCBP-201ENST00000260130 STRAPQ9Y3F4 350 aaKnown RBP13.33□□□□□ -0.28
SDCBP-201ENST00000260130 NCBP2LA6PVI3 153 aaKnown RBP13.32□□□□□ -0.28
SDCBP-201ENST00000260130 C9JQL5 133 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 LYZL2Q7Z4W2 148 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 MOB3AQ96BX8 217 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 RBMXL1Q96E39 390 aaKnown RBP13.32□□□□□ -0.28
SDCBP-201ENST00000260130 SERTAD4Q9NUC0 356 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 COA4Q9NYJ1 87 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 ST8SIA3O43173 380 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 CAMLGP49069 296 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 PPT1P50897 306 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 HERV-K104P61576 105 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 PHLDA2Q53GA4 152 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 ARSJQ5FYB0 599 aaPredicted RBP13.32□□□□□ -0.28
SDCBP-201ENST00000260130 OR2W1Q9Y3N9 320 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 TMED3Q9Y3Q3 217 aa13.32□□□□□ -0.28
SDCBP-201ENST00000260130 SH2D7A6NKC9 451 aaPredicted RBP13.31□□□□□ -0.28
SDCBP-201ENST00000260130 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 GUK1Q16774 197 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 MC5RP33032 325 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 KRTAP10-3P60369 221 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 SRPXP78539 464 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 OR5AN1Q8NGI8 311 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 C2CD4CQ8TF44 421 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 RSRP1Q9BUV0 290 aa13.31□□□□□ -0.28
SDCBP-201ENST00000260130 C1orf196B1AJZ1 125 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 VDAC2P45880 294 aaPredicted RBP13.3□□□□□ -0.28
SDCBP-201ENST00000260130 RNF212Q495C1 297 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 C9orf152Q5JTZ5 239 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 SFT2D1Q8WV19 159 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 WFDC1Q9HC57 220 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 RPS10P5Q9NQ39 176 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 H0YJW9 148 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 M0R1X1 148 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 PRH1P02810 166 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 S100A12P80511 92 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 AKIRIN2Q53H80 203 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 ZFP82Q8N141 532 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 Q8N9W7 124 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 RITA1Q96K30 269 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 CITED1Q99966 193 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 PBDC1Q9BVG4 233 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
SDCBP-201ENST00000260130 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
SDCBP-201ENST00000260130 TUSC2O75896 110 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 MEOX2P50222 304 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 LINC00205P59089 165 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 CTAG1AP78358 180 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 KLHDC1Q8N7A1 406 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 ZNF383Q8NA42 475 aa13.29□□□□□ -0.28
SDCBP-201ENST00000260130 LFNGQ8NES3 379 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms