RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 YIF1AO95070 293 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 SFTPCP11686 197 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
PRKAB1-201ENST00000229328 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 BTF3P20290 206 aaKnown RBP11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 FAM71F2Q6NXP2 309 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 FAM122AQ96E09 287 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 RAB1BQ9H0U4 201 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 UNKLQ9H9P5 680 aaKnown RBP11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 A0A1W2PPE2 198 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 FSTL3O95633 263 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 IGLV2-23P01705 113 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 RHEBQ15382 184 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 SLC16A13Q7RTY0 426 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 GGTLC1Q9BX51 225 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 PATZ1Q9HBE1 687 aaKnown RBP11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 VAX2Q9UIW0 290 aa11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
PRKAB1-201ENST00000229328 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 SMIM6P0DI80 62 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 WDR25Q64LD2 544 aaPredicted RBP11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 MOB3BQ86TA1 216 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 MPDU1O75352 247 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 CD81P60033 236 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 SSTP61278 116 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 C2CD4CQ8TF44 421 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
PRKAB1-201ENST00000229328 A0A1W2PPH5 198 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 CYB5BO43169 146 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 CRYBA1P05813 215 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 GNLYP22749 145 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 OPRK1P41145 380 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 CDC34P49427 236 aaPredicted RBP11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 RPL8P62917 257 aaKnown RBP11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 OR5B3Q8NH48 314 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 FKBP11Q9NYL4 201 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 MLANAQ16655 118 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 OR8B3Q8NGG8 313 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 OR8B2Q96RD0 313 aa11.66□□□□□ -0.54
PRKAB1-201ENST00000229328 CGB1A6NKQ9 187 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 SEC14L6B5MCN3 397 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 C22orf46C9J442 243 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 IFNA1P01562 189 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 S100A9P06702 114 aaKnown RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 COX7A1P24310 79 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 HLA-DRB5Q30154 266 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 TMEM167AQ8TBQ9 72 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 NEIL1Q96FI4 390 aaPredicted RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 NIPSNAP3BQ9BS92 247 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 COMMD5Q9GZQ3 224 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 ZNF430Q9H8G1 570 aaPredicted RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 SLC25A17O43808 307 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 BSXQ3C1V8 233 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 ITLN2Q8WWU7 325 aaPredicted RBP11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 TVP23CQ96ET8 276 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 P2RX4Q99571 388 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
PRKAB1-201ENST00000229328 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 IGFBP2P18065 325 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 TAGLN2P37802 199 aaKnown RBP11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 MEF2BQ02080 365 aaPredicted RBP11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 CFAP46Q8IYW2 2715 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 C2orf83Q53S99 150 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 SLC35E3Q7Z769 313 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 OR1L8Q8NGR8 309 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 C8orf46Q8TAG6 207 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 CLEC7AQ9BXN2 247 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 TUBA4BQ9H853 241 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
PRKAB1-201ENST00000229328 C19orf84I3L1E1 186 aa11.63□□□□□ -0.55
PRKAB1-201ENST00000229328 NDUFS7O75251 213 aa11.63□□□□□ -0.55
PRKAB1-201ENST00000229328 PAX6P26367 422 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms