RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 LTBRP36941 435 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 TMEM42Q69YG0 159 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 TMEM167AQ8TBQ9 72 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 RPRMQ9NS64 109 aa11.19□□□□□ -0.62
COL1A1-201ENST00000225964 TBL2Q9Y4P3 447 aaKnown RBP11.19□□□□□ -0.62
COL1A1-201ENST00000225964 NUP214P35658 2090 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-201ENST00000225964 CRPP02741 224 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 PAX1P15863 534 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 SCN8AQ9UQD0 1980 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 RAMP1O60894 148 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 SLC25A34Q6PIV7 304 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 PIKFYVEQ9Y2I7 2098 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 TRAV8-6A0A0B4J262 113 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 SAA1P0DJI8 122 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-201ENST00000225964 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 WDYHV1Q96HA8 205 aa11.18□□□□□ -0.62
COL1A1-201ENST00000225964 EIF4EBP2Q13542 120 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-201ENST00000225964 POC1AQ8NBT0 407 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 OR11H4Q8NGC9 324 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 KBTBD11-OT1A0A1B0GTJ5 212 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 THBDP07204 575 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF506Q5JVG8 444 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 C17orf100A8MU93 164 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 CGAP01215 116 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 EGR1P18146 543 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 TFF3Q07654 80 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-201ENST00000225964 NDUFA3O95167 84 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 CD7P09564 240 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 NBEAP1P0C6P0 100 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 J3QW42 95 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 GREM1O60565 184 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 SOX21Q9Y651 276 aaPredicted RBP11.17□□□□□ -0.62
COL1A1-201ENST00000225964 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF708P17019 499 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 RND3P61587 244 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
COL1A1-201ENST00000225964 TNS1Q9HBL0 1735 aaKnown RBP11.16□□□□□ -0.62
COL1A1-201ENST00000225964 LOC390937A0A1W2PQ73 354 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 SOD3P08294 240 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.16□□□□□ -0.62
COL1A1-201ENST00000225964 SLC25A38Q96DW6 304 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 CD24P25063 80 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 SRD5A1P18405 259 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF385CQ66K41 422 aaPredicted RBP11.16□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF414Q96IQ9 312 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
COL1A1-201ENST00000225964 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 TRGV4A0A0C4DH28 118 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 ZNF688P0C7X2 276 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 C17orf98A8MV24 154 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 EGR4Q05215 589 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 OR10J3Q5JRS4 329 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
COL1A1-201ENST00000225964 MYOD1P15172 320 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 HOXA5P20719 270 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 UCP3P55916 312 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 IGLV3-21P80748 117 aaPredicted RBP11.15□□□□□ -0.62
COL1A1-201ENST00000225964 CTHRC1Q96CG8 243 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 SELENOKQ9Y6D0 94 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 LYNX1G3V0Z9 82 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 NBR2O15453 112 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 LYNX1P0DP58 116 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 GATAD1Q8WUU5 269 aa11.15□□□□□ -0.62
COL1A1-201ENST00000225964 IFI6P09912 130 aa11.15□□□□□ -0.63
COL1A1-201ENST00000225964 CCL3L1P16619 93 aa11.15□□□□□ -0.63
COL1A1-201ENST00000225964 SPACA3Q8IXA5 215 aa11.15□□□□□ -0.63
COL1A1-201ENST00000225964 JKAMPQ9P055 326 aa11.15□□□□□ -0.63
COL1A1-201ENST00000225964 Q9H3A6 140 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 OR11H12B2RN74 326 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
COL1A1-201ENST00000225964 MEF2CQ06413 473 aaPredicted RBP11.14□□□□□ -0.63
COL1A1-201ENST00000225964 OR11H1Q8NG94 326 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 OR52E5Q8NH55 327 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 C11orf68Q9H3H3 251 aaKnown RBP11.14□□□□□ -0.63
COL1A1-201ENST00000225964 PARP14Q460N5 1801 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 TRAV40A0A0B4J280 105 aa11.14□□□□□ -0.63
COL1A1-201ENST00000225964 PPP1R3EQ9H7J1 279 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms