RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RELBQ01201 579 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 TMEM183AQ8IXX5 376 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
UBE2D4-201ENST00000222402 CGAP01215 116 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 IGLV1-44P01699 117 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 IER3P46695 156 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 BPIFB3P59826 476 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 UBE2G1P62253 170 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 DUX4L9Q6RFH8 374 aaPredicted RBP12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 TIMM8BQ9Y5J9 83 aaPredicted RBP12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 GFRA3O60609 400 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 ORM2P19652 201 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 CRYBB3P26998 211 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 RPL8P62917 257 aaKnown RBP12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF331Q9NQX6 463 aaPredicted RBP12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 RND2P52198 227 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF134P52741 427 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 SSX2Q16385 188 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 VSTM2AQ8TAG5 236 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 MGST2Q99735 147 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 AGMATQ9BSE5 352 aa12.35□□□□□ -0.43
UBE2D4-201ENST00000222402 CNIH1O95406 144 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 CRISP2P16562 243 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 RPEL1Q2QD12 228 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 WNT2P09544 360 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 COX7A1P24310 79 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 SLC17A3O00476 420 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 BATFQ16520 125 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 BLNKQ8WV28 456 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 ZNRD1Q9P1U0 126 aa12.34□□□□□ -0.43
UBE2D4-201ENST00000222402 MUC6Q6W4X9 2439 aa12.33□□□□□ -0.43
UBE2D4-201ENST00000222402 IGHV3-21A0A0B4J1V1 117 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 PLAUP00749 431 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 SPRNQ5BIV9 151 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 SEBOXQ9HB31 216 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 DCAF16Q9NXF7 216 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 ZNF705AQ6ZN79 300 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 OR1L6Q8NGR2 347 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 SNRNP40Q96DI7 357 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 LINC00869P0C866 280 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 PKIAP61925 76 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 EFNB3Q15768 340 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 TNXAQ16473 311 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 FAM57AQ8TBR7 257 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 DAZAP1Q96EP5 407 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 SEPSECSQ9HD40 501 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 DKK4Q9UBT3 224 aa12.33□□□□□ -0.44
UBE2D4-201ENST00000222402 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 SLC25A17O43808 307 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 LINC01551Q86U37 167 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 A0A1W2PN81 502 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 NTF3P20783 257 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 TOMM20LQ6UXN7 152 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 ABHD17AQ96GS6 310 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 FAM90A9PA6NNJ1 464 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 F2RL2O00254 374 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 STAG3L2P0CL84 134 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 STAG3L3P0CL85 134 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 SAA1P0DJI8 122 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 HES1Q14469 280 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 FXYD3Q14802 87 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 HCP5Q6MZN7 132 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
UBE2D4-201ENST00000222402 ARFGEF3Q5TH69 2177 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 TOX4O94842 621 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 REG1AP05451 166 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 CBLN1P23435 193 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 TPPP2P59282 170 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 DOLPP1Q86YN1 238 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 SIGLECL1Q8N7X8 197 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 OCC1Q8TAD7 63 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 C17orf100A8MU93 164 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 PFN1P07737 140 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 OR5I1Q13606 314 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 PIP4P1Q86T03 277 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 OR5AU1Q8NGC0 362 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 OR10W1Q8NGF6 305 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-201ENST00000222402 UPK2O00526 184 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 CCKARP32238 428 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 TIMP3P35625 211 aa12.3□□□□□ -0.44
UBE2D4-201ENST00000222402 KRTDAPP60985 99 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms