RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 AMMECR1Q9Y4X0 333 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 INSIG2Q9Y5U4 225 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 USP24Q9UPU5 2620 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 M0R1W7 72 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 EIF3GO75821 320 aaKnown RBP eCLIP13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 LGALS7P47929 136 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 BSXQ3C1V8 233 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 VMA21Q3ZAQ7 101 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 C1orf159Q96HA4 380 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 MGST2Q99735 147 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 ZNF430Q9H8G1 570 aaPredicted RBP13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
RABGGTA-201ENST00000216840 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 LOC102723971A0A1B0GUV8 181 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 E7EUB6 86 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 SLC25A17O43808 307 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 OR13C7P0DN81 318 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 MOB3BQ86TA1 216 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 NPVFQ9HCQ7 196 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 SIRT7Q9NRC8 400 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 LSM4Q9Y4Z0 139 aaKnown RBP13.9□□□□□ -0.18
RABGGTA-201ENST00000216840 CTXND1A0A1B0GTU2 59 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 CGB1A6NKQ9 187 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 SRP19P09132 144 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 RNASE2P10153 161 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 MRGPRG-AS1Q2M3A8 158 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 C2orf83Q53S99 150 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 SLC25A22Q9H936 323 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 TPSG1Q9NRR2 321 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 INS-IGF2F8WCM5 200 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 OVOL3O00110 214 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 OPRK1P41145 380 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 KHDC3LQ587J8 217 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 LDLRAD2Q5SZI1 272 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 OR11H6Q8NGC7 330 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 RPEQ96AT9 228 aa13.89□□□□□ -0.19
RABGGTA-201ENST00000216840 HSPB1P04792 205 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-201ENST00000216840 ACOT6Q3I5F7 207 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-201ENST00000216840 FAM122CQ6P4D5 195 aa13.88□□□□□ -0.19
RABGGTA-201ENST00000216840 GGTLC1Q9BX51 225 aa13.88□□□□□ -0.19
RABGGTA-201ENST00000216840 ACTR3CQ9C0K3 210 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-201ENST00000216840 FNDC10F2Z333 226 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 SOX15O60248 233 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 BCL2P10415 239 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 PRTN3P24158 256 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 ZFP36P26651 326 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 HCP5Q6MZN7 132 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 TEX45Q8NA69 505 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 A0A1W2PN81 502 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 A0A1W2PPI3 338 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 ZFP92A6NM28 416 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 TSPAN4O14817 238 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 HMGB3O15347 200 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 YIF1AO95070 293 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 IGHV2-5P01817 119 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 CRYGBP07316 175 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 FBP1P09467 338 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 CNTFRP26992 372 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 CHRNA7P36544 502 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 PMS2P11Q13670 270 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 SOHLH1Q5JUK2 328 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 TMEM88Q6PEY1 159 aa13.87□□□□□ -0.19
RABGGTA-201ENST00000216840 PLXNB1O43157 2135 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 CYB5BO43169 146 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 ERHP84090 104 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 KLRD1Q13241 179 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 GCSAMLQ5JQS6 135 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 TPTE2P1Q5T6R2 138 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 MIC13Q5XKP0 118 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 TEPPQ6URK8 271 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 SEC14L6B5MCN3 397 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 RNF224P0DH78 156 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 DEFA4P12838 97 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 HTR1DP28221 377 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 PSG5Q15238 335 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 C1orf122Q6ZSJ8 110 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 CBLN2Q8IUK8 224 aa13.86□□□□□ -0.19
RABGGTA-201ENST00000216840 ODF3BA8MYP8 253 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 PRB1P04280 392 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 CDC34P49427 236 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 PRSS8Q16651 343 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 KIR3DL3Q8N743 410 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 CYB561D1Q8N8Q1 229 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 IGFBPL1Q8WX77 278 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 TMPRSS5Q9H3S3 457 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 DPM3Q9P2X0 92 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 AKAP6Q13023 2319 aa13.85□□□□□ -0.19
RABGGTA-201ENST00000216840 GOSR1O95249 250 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 MMD2Q8IY49 270 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 SSMEM1Q8WWF3 244 aa13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 BBC3Q96PG8 261 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-201ENST00000216840 UNKLQ9H9P5 680 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms