RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 HIST1H1BP16401 226 aaKnown RBP13.56□□□□□ -0.24
PTPN11-207ENST00000639857 PSMB6P28072 239 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 RPEL1Q2QD12 228 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 OR9G4Q8NGQ1 327 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 SIGLEC8Q9NYZ4 499 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 EXTL2Q9UBQ6 330 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
PTPN11-207ENST00000639857 A0A1B0GW64 132 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 MARCH11A6NNE9 402 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 E7EUB6 86 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 LY86O95711 162 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 IGLV1-51P01701 117 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 PRH1P02810 166 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 CTRB1P17538 263 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 OR2B8PP59922 312 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 DEFA5Q01523 94 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 CTRB2Q6GPI1 263 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
PTPN11-207ENST00000639857 SLC38A6Q8IZM9 456 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
PTPN11-207ENST00000639857 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 NHLRC4P0CG21 123 aaPredicted RBP13.54□□□□□ -0.24
PTPN11-207ENST00000639857 GP9P14770 177 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 AREGP15514 252 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 SPNP16150 400 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 TMBIM6P55061 237 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 SYNJ2BPP57105 145 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 MRPS10P82664 201 aaKnown RBP13.54□□□□□ -0.24
PTPN11-207ENST00000639857 ARRDC1Q8N5I2 433 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 RABL2AQ9UBK7 228 aaPredicted RBP13.54□□□□□ -0.24
PTPN11-207ENST00000639857 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 RABL2BQ9UNT1 228 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 SMAD5-AS1Q9Y6J3 95 aa13.54□□□□□ -0.24
PTPN11-207ENST00000639857 CGB1A6NKQ9 187 aa13.53□□□□□ -0.24
PTPN11-207ENST00000639857 OR2J3O76001 311 aa13.53□□□□□ -0.24
PTPN11-207ENST00000639857 SSBP1Q04837 148 aaKnown RBP13.53□□□□□ -0.24
PTPN11-207ENST00000639857 RNASE10Q5GAN6 216 aaKnown RBP13.53□□□□□ -0.24
PTPN11-207ENST00000639857 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
PTPN11-207ENST00000639857 ZNF486Q96H40 463 aaPredicted RBP13.53□□□□□ -0.24
PTPN11-207ENST00000639857 FANCD2OSQ96PS1 177 aa13.53□□□□□ -0.24
PTPN11-207ENST00000639857 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
PTPN11-207ENST00000639857 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
PTPN11-207ENST00000639857 FBXL7Q9UJT9 491 aa13.53□□□□□ -0.24
PTPN11-207ENST00000639857 IGLC7A0M8Q6 106 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 BMPR1BO00238 502 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 CYB5BO43169 146 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 IFNA6P05013 189 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 PTBP1P26599 531 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPN11-207ENST00000639857 LPAR6P43657 344 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 RPL5P46777 297 aaKnown RBP13.52□□□□□ -0.25
PTPN11-207ENST00000639857 SPCS2Q15005 226 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 ZNF585BQ52M93 769 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
PTPN11-207ENST00000639857 OR52I2Q8NH67 350 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 TSC22D3Q99576 134 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 KLK11Q9UBX7 282 aa13.52□□□□□ -0.25
PTPN11-207ENST00000639857 IGLV11-55A0A075B6I3 123 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 TRAV3A0A0B4J244 114 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 H0Y980 276 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 GABARAPH6UMI1 98 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 RGS5O15539 181 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 DEFA4P12838 97 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 RND3P61587 244 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 LHFPL1Q86WI0 220 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 EEF1AKMT3Q96AZ1 226 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 ABHD1Q96SE0 405 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 FKBP11Q9NYL4 201 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 THYN1Q9P016 225 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 DNAH9Q9NYC9 4486 aa13.51□□□□□ -0.25
PTPN11-207ENST00000639857 TRBV7-1A0A0A6YYK4 115 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 NOL3O60936 208 aaKnown RBP13.5□□□□□ -0.25
PTPN11-207ENST00000639857 GGCTO75223 188 aaKnown RBP13.5□□□□□ -0.25
PTPN11-207ENST00000639857 SNAPC5O75971 98 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 CD74P04233 296 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 TRAPPC2P0DI81 140 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 TRAPPC2BP0DI82 140 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 MYOD1P15172 320 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 TAS2R19P59542 299 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 TBC1D26Q86UD7 250 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 LAX1Q8IWV1 398 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 TMEM229BQ8NBD8 167 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 OR2K2Q8NGT1 345 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 DYNC2LI1Q8TCX1 351 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 MIXL1Q9H2W2 232 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 PRNDQ9UKY0 176 aa13.5□□□□□ -0.25
PTPN11-207ENST00000639857 M0QYG6 137 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 LGALS9O00182 355 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 KRASP01116 189 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 CSN3P07498 182 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 RPA2P15927 270 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 G6PCP35575 357 aa13.49□□□□□ -0.25
PTPN11-207ENST00000639857 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms