RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 GNG2P59768 71 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 SPCS2Q15005 226 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 RBMY1FQ15415 496 aaKnown RBP10.16□□□□□ -0.78
SNX1-214ENST00000625244 CDNFQ49AH0 187 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 PLAC9Q5JTB6 97 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 TMEM69Q5SWH9 247 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 DRAXINQ8NBI3 349 aaPredicted RBP10.16□□□□□ -0.78
SNX1-214ENST00000625244 ABHD14BQ96IU4 210 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 CMTM3Q96MX0 182 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 NDUFA13Q9P0J0 144 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 TRAV18A0A075B6X5 111 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 TRBV6-6A0A0A6YYG2 114 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 FAM223BA6NKX1 122 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 FAM25AB3EWG3 89 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 FAM25CB3EWG5 89 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 FAM25GB3EWG6 89 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 RGS5O15539 181 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 GGCTO75223 188 aaKnown RBP10.15□□□□□ -0.78
SNX1-214ENST00000625244 TUSC2O75896 110 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 NAPSAO96009 420 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 APOA1P02647 267 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 CRYGBP07316 175 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 HACD4Q5VWC8 232 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 GPHB5Q86YW7 130 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 FAM223AQ8IWN6 122 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 OR11H2Q8NH07 326 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.78
SNX1-214ENST00000625244 CCDC59Q9P031 241 aaKnown RBP10.15□□□□□ -0.78
SNX1-214ENST00000625244 TRBV9A0A0B4J1U6 114 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 TRAV25A0A0B4J276 109 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 ZNF320A2RRD8 509 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 ZNF701M0R085 212 aaPredicted RBP10.14□□□□□ -0.79
SNX1-214ENST00000625244 IGLV2-23P01705 113 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 HLA-DRB3P79483 266 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
SNX1-214ENST00000625244 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 IL1F10Q8WWZ1 152 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 PHB2Q99623 299 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 HDHD3Q9BSH5 251 aaPredicted RBP10.14□□□□□ -0.79
SNX1-214ENST00000625244 Q9N2K0 584 aa10.14□□□□□ -0.79
SNX1-214ENST00000625244 TMEM235A6NFC5 223 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 HPGDSO60760 199 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 PROP1O75360 226 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 FCGR3AP08637 254 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 DTYMKP23919 212 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 HMGN3Q15651 99 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 MRGPRG-AS1Q2M3A8 158 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 ZNF880Q6PDB4 577 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 Q6ZR54 194 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 ZNF383Q8NA42 475 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 DYNC2LI1Q8TCX1 351 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 KCNK7Q9Y2U2 307 aa10.13□□□□□ -0.79
SNX1-214ENST00000625244 IGLV2-18A0A075B6J9 118 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 A8MWP6 167 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 P0DMU3 169 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 ZBTB25P24278 435 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 CBX5P45973 191 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 TAS2R20P59543 309 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 C15orf32Q32M92 178 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 OR4A4PQ8NGN8 299 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 OR5B3Q8NH48 314 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 C15orf40Q8WUR7 153 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 NUDCD2Q8WVJ2 157 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 AGMATQ9BSE5 352 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 C6orf62Q9GZU0 229 aaPredicted RBP10.12□□□□□ -0.79
SNX1-214ENST00000625244 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
SNX1-214ENST00000625244 MRPS7Q9Y2R9 242 aaKnown RBP10.12□□□□□ -0.79
SNX1-214ENST00000625244 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 FABP7O15540 132 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 OR2J3O76001 311 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 IGHV3-23P01764 117 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 EIF4EP06730 217 aaKnown RBP10.11□□□□□ -0.79
SNX1-214ENST00000625244 Q6ZTC4 211 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 PDPNQ86YL7 162 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 MCFD2Q8NI22 146 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 EDARADDQ8WWZ3 215 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 DGCR14Q96DF8 476 aaKnown RBP10.11□□□□□ -0.79
SNX1-214ENST00000625244 CCDC140Q96MF4 163 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
SNX1-214ENST00000625244 GINS4Q9BRT9 223 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 DCUN1D5Q9BTE7 237 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 RNF126Q9BV68 326 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 RBM38Q9H0Z9 239 aaKnown RBP10.11□□□□□ -0.79
SNX1-214ENST00000625244 HRH4Q9H3N8 390 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 AUNIPQ9H7T9 357 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 EXTL2Q9UBQ6 330 aa10.11□□□□□ -0.79
SNX1-214ENST00000625244 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 SHOXO15266 292 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 SCTP09683 121 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 CTXN2P0C2S0 81 aa10.1□□□□□ -0.79
SNX1-214ENST00000625244 C8orf88P0DMB2 117 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms