RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 HSD17B10Q99714 261 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 PRELID3BQ9Y3B1 194 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 PHLDA2Q53GA4 152 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 KCTD9Q7L273 389 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 ZNF383Q8NA42 475 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 BVESQ8NE79 360 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 SPATA25Q9BR10 227 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 RSRP1Q9BUV0 290 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 SLC35D1Q9NTN3 355 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 SLC2A8Q9NY64 477 aa12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 C14orf166Q9Y224 244 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-215ENST00000597649 H0YJW9 148 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 UPK1BO75841 260 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 RRASP10301 218 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 LINC00205P59089 165 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 SURF2Q15527 256 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 IL34Q6ZMJ4 242 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 POC5Q8NA72 575 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 OR5AN1Q8NGI8 311 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 OR13C8Q8NGS7 320 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 DNAH10Q8IVF4 4471 aa12.56□□□□□ -0.4
SHKBP1-215ENST00000597649 RRHO14718 337 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 FCGR3BO75015 233 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 PGLYRP1O75594 196 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 ELOVL1Q9BW60 279 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 COPZ2Q9P299 210 aa12.55□□□□□ -0.4
SHKBP1-215ENST00000597649 LINC00473A8K010 186 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 LYRM1O43325 122 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 RLN1P04808 185 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 CTSDP07339 412 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 PI3P19957 117 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 TPPP2P59282 170 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 RPL30P62888 115 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 OR2B11Q5JQS5 317 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 GPHA2Q96T91 129 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 SLC25A21Q9BQT8 299 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 RETNQ9HD89 108 aa12.54□□□□□ -0.4
SHKBP1-215ENST00000597649 PLA2G10O15496 165 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 CCR6P51684 374 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 PIGPP57054 158 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 TMEM267Q0VDI3 215 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 KLF5Q13887 457 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 RBMS2Q15434 407 aaKnown RBP12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 UNQ5815/PRO19632Q6UWF5 114 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 SPAG16Q8N0X2 631 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 ABHD5Q8WTS1 349 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 DDB2Q92466 427 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 RNF5Q99942 180 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
SHKBP1-215ENST00000597649 TEX13DA0A0J9YY54 714 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 SHOXO15266 292 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 MPPED1O15442 326 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 JTBO76095 146 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 CRYZL1O95825 349 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 DEFA1P59665 94 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 DEFA3P59666 94 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 RND3P61587 244 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 CD300LFQ8TDQ1 290 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 MRGPRFQ96AM1 343 aa12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-215ENST00000597649 ARPC1BO15143 372 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 TRGV3P03979 118 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 IGKV1-16P04430 117 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 F2RP25116 425 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 LGALS7P47929 136 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 ASAH1Q13510 395 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 PLGLAQ15195 96 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 TMED4Q7Z7H5 227 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 HARBI1Q96MB7 349 aa12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 RTBDNQ9BSG5 229 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-215ENST00000597649 FAM240BA0A1B0GVZ2 78 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
SHKBP1-215ENST00000597649 IZUMO1RA6ND01 250 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms