RNA–Protein interactions for RNA: ENST00000586299.1

CYTH1-206, Transcript of cytohesin 1, human

Gene CYTH1, Length 4,423 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH1-206	ENST00000586299		Q0VFX4	171 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	ZNF506	Q5JVG8	444 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	ZNF524	Q96C55	264 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	ZNF581	Q9P0T4	197 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	SPRR3	Q9UBC9	169 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMEM56-RWDD3	S4R434	201 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	DOCK11	Q5JSL3	2073 aa		11.77	□□□□□ -0.53
CYTH1-206	ENST00000586299	CDX1	P47902	265 aa	Predicted RBP	11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	EIF4E3	Q8N5X7	224 aa	Known RBP	11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	HSPB9	Q9BQS6	159 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	NPCDR1	Q9BY65	106 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	IGHV1-69-2	A0A0G2JMI3	117 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	CD55	P08174	381 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	SRP19	P09132	144 aa	Known RBP	11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	RIG	Q13278	110 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	LRRC75B	Q2VPJ9	315 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	MUC15	Q8N387	334 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	PNRC2	Q9NPJ4	139 aa	Known RBP	11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	GTF3C1	Q12789	2109 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	IQCF6	A8MYZ5	107 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	ISLR	O14498	428 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	SSX8	Q7RTT4	187 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	LHFPL1	Q86WI0	220 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	NDUFA2	O43678	99 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	SCNM1	Q9BWG6	230 aa		11.76	□□□□□ -0.53
CYTH1-206	ENST00000586299	MOS	P00540	346 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	PRB3	Q04118	309 aa	Predicted RBP	11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	GLRX5	Q86SX6	157 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	SNRNP40	Q96DI7	357 aa	Known RBP	11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	BET1L	Q9NYM9	111 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	TEX50	A0A1B0GTY4	177 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299		A8MWL6	223 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	DDT	P30046	118 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	PNKD	Q8N490	385 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	ZNF525	Q8N782	197 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	C18orf12	Q96KH6	178 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	HTN1	P15515	57 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	PCSK4	Q6UW60	755 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	GBGT1	Q8N5D6	347 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	OR4A5	Q8NH83	315 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	SPSB4	Q96A44	273 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	WDR87	Q6ZQQ6	2873 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	MUC6	Q6W4X9	2439 aa		11.75	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMEM250	H0YL14	139 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	RAMP3	O60896	148 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	GATA2	P23769	480 aa	Predicted RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	GCHFR	P30047	84 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	SRP14	P37108	136 aa	Known RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	FOXF2	Q12947	444 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	OR4A47	Q6IF82	309 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	WFDC3	Q8IUB2	231 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	OR1P1	Q8NH06	330 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	GGACT	Q9BVM4	153 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMEM191A	Q9H0A3	160 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	GRIFIN	A4D1Z8	144 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	CXorf65	A6NEN9	183 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	FCGR2B	P31994	310 aa	Predicted RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	SEMA5B	Q9P283	1151 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	ACACB	O00763	2458 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	DIRC3	C9JPN6	131 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	CCL3L1	P16619	93 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	MPZ	P25189	248 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	BSPH1	Q075Z2	132 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	WDR82	Q6UXN9	313 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	RBM14	Q96PK6	669 aa	Known RBP	11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMEM106B	Q9NUM4	274 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	RABAC1	Q9UI14	185 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMEM186	Q96B77	213 aa		11.74	□□□□□ -0.53
CYTH1-206	ENST00000586299	IGKV3D-15	A0A087WSY6	115 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	IL6R	P08887	468 aa	Predicted RBP	11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	IGFBP2	P18065	325 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	CCL20	P78556	96 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	ID3	Q02535	119 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	ZNF146	Q15072	292 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	OR51G1	Q8NGK1	321 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	GFRA1	P56159	465 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	TCTA	P57738	103 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	BPIFA4P	Q86YQ2	179 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	BMPER	Q8N8U9	685 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	WFDC1	Q9HC57	220 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	CACNA1A	O00555	2505 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	CORT	O00230	105 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	TMPRSS3	P57727	454 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	RPL30	P62888	115 aa	Known RBP	11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	WDR31	Q8NA23	367 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	ELOVL1	Q9BW60	279 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	MRPL18	Q9H0U6	180 aa	Known RBP	11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	RALY	Q9UKM9	306 aa	Known RBP	11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	PTPRQ	Q9UMZ3	2332 aa		11.73	□□□□□ -0.53
CYTH1-206	ENST00000586299	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	CGB1	A6NKQ9	187 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299		M0QZK8	103 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	GGCT	O75223	188 aa	Known RBP	11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	C21orf62-AS1	Q17RA5	79 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	OR8A1	Q8NGG7	326 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	CLEC7A	Q9BXN2	247 aa		11.72	□□□□□ -0.53
CYTH1-206	ENST00000586299	DMRT1	Q9Y5R6	373 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms