RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 COMMD9Q9P000 198 aa9.48□□□□□ -0.89
SMARCD2-209ENST00000581832 PEF1Q9UBV8 284 aaKnown RBP9.48□□□□□ -0.89
SMARCD2-209ENST00000581832 ZNF257Q9Y2Q1 563 aa9.48□□□□□ -0.89
SMARCD2-209ENST00000581832 IGLC7A0M8Q6 106 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 FAM223BA6NKX1 122 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 H3BMQ9 156 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 MPPED1O15442 326 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 SAP30O75446 220 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 CD74P04233 296 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 ZP3P21754 424 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 PSMB6P28072 239 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 LPAR6P43657 344 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 TSPAN5P62079 268 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 RNASE12Q5GAN4 147 aaKnown RBP9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 SLC25A42Q86VD7 318 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 CMTM1Q8IZ96 169 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 NECAP1Q8NC96 275 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 OR4D10Q8NGI6 311 aa9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 FYTTD1Q96QD9 318 aaKnown RBP9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 SLIRPQ9GZT3 109 aaKnown RBP9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 FAM212BQ9NTI7 297 aaPredicted RBP9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 CCDC59Q9P031 241 aaKnown RBP9.47□□□□□ -0.89
SMARCD2-209ENST00000581832 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.89
SMARCD2-209ENST00000581832 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 MARCH11A6NNE9 402 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 BMPR1BO00238 502 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 RPA2P15927 270 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 PTBP1P26599 531 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 PHLDA2Q53GA4 152 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 TBC1D26Q86UD7 250 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 C15orf40Q8WUR7 153 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 MRGPRFQ96AM1 343 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 ISOC1Q96CN7 298 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 B9D2Q9BPU9 175 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 SOSTQ9BQB4 213 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 NXF2Q9GZY0 626 aaKnown RBP9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 HRASLSQ9HDD0 168 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 CEPT1Q9Y6K0 416 aa9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 HUWE1Q7Z6Z7 4374 aaKnown RBP9.46□□□□□ -0.9
SMARCD2-209ENST00000581832 IGLV11-55A0A075B6I3 123 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 TEX50A0A1B0GTY4 177 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 GABARAPH6UMI1 98 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 CTDSPLO15194 276 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 RGS5O15539 181 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 OR2J3O76001 311 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 NDUFB8O95169 186 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 SPNP16150 400 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 TBPP20226 339 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 ATP5G2Q06055 141 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 C15orf32Q32M92 178 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 ARRDC1Q8N5I2 433 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 TMEM229BQ8NBD8 167 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 DMBX1Q8NFW5 382 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 OR10W1Q8NGF6 305 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 SMIM4Q8WVI0 70 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 SEC22AQ96IW7 307 aa9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
SMARCD2-209ENST00000581832 DBX1A6NMT0 343 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 KRASP01116 189 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 REG1AP05451 166 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 CSN3P07498 182 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 G6PCP35575 357 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 MECP2P51608 486 aaKnown RBP9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 RND3P61587 244 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 SSBP1Q04837 148 aaKnown RBP9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 EXOSC2Q13868 293 aaKnown RBP9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 RNASE10Q5GAN6 216 aaKnown RBP9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 HAPLN4Q86UW8 402 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 NDUFA4L2Q9NRX3 87 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 NSG2Q9Y328 171 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
SMARCD2-209ENST00000581832 TAS2R19P59542 299 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 MRPS10P82664 201 aaKnown RBP9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 TERB2Q8NHR7 220 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 ZNF486Q96H40 463 aaPredicted RBP9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 DIRAS2Q96HU8 199 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 ELOVL1Q9BW60 279 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 COMMD5Q9GZQ3 224 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 RBM38Q9H0Z9 239 aaKnown RBP9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 TMEM14BQ9NUH8 114 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 SIGLEC8Q9NYZ4 499 aa9.43□□□□□ -0.9
SMARCD2-209ENST00000581832 DNAH7Q8WXX0 4024 aa9.42□□□□□ -0.9
SMARCD2-209ENST00000581832 DPPA5A6NC42 116 aa9.42□□□□□ -0.9
SMARCD2-209ENST00000581832 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
SMARCD2-209ENST00000581832 GSTZ1O43708 216 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms