RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
RAB40B-204ENST00000571554 TMEM127O75204 238 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 HPRT1P00492 218 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 CRYGCP07315 174 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 NQO2P16083 231 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 CTRB1P17538 263 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 PRSS3P35030 304 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 ARL3P36405 182 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 TAS2R31P59538 309 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 OR2B8PP59922 312 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 CD300EQ496F6 205 aaPredicted RBP10.42□□□□□ -0.74
RAB40B-204ENST00000571554 RNASE12Q5GAN4 147 aaKnown RBP10.42□□□□□ -0.74
RAB40B-204ENST00000571554 CTRB2Q6GPI1 263 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 SNX29P2Q8IUI4 249 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 Q8N402 240 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 OR10W1Q8NGF6 305 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 OR4A5Q8NH83 315 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 DYNLRB2Q8TF09 96 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 MOB3AQ96BX8 217 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 THAP7Q9BT49 309 aaPredicted RBP10.42□□□□□ -0.74
RAB40B-204ENST00000571554 PLEKHA3Q9HB20 300 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 C19orf73Q9NVV2 129 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 ANAPC10Q9UM13 185 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 DNAH7Q8WXX0 4024 aa10.42□□□□□ -0.74
RAB40B-204ENST00000571554 IGLC7A0M8Q6 106 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
RAB40B-204ENST00000571554 HRH1P35367 487 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
RAB40B-204ENST00000571554 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 TUBA4BQ9H853 241 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 NSG2Q9Y328 171 aa10.41□□□□□ -0.74
RAB40B-204ENST00000571554 IGLV11-55A0A075B6I3 123 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 IGHV3-35A0A0C4DH35 117 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 ZNF320A2RRD8 509 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 C2orf70A6NJV1 201 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 HPGDSO60760 199 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 PGLYRP1O75594 196 aaPredicted RBP10.4□□□□□ -0.74
RAB40B-204ENST00000571554 DHFRP00374 187 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 CD7P09564 240 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 FOLR2P14207 255 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 NAT1P18440 290 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 LPAR6P43657 344 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 MECP2P51608 486 aaKnown RBP10.4□□□□□ -0.74
RAB40B-204ENST00000571554 TAS2R46P59540 309 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 CD81P60033 236 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 POU2AF1Q16633 256 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 PHLDA2Q53GA4 152 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 DHRS11Q6UWP2 260 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 LYSMD2Q8IV50 215 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 MUC7Q8TAX7 377 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 FCAMRQ8WWV6 532 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 TM2D3Q9BRN9 247 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 AIFM2Q9BRQ8 373 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 HINT2Q9BX68 163 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 NAA50Q9GZZ1 169 aaKnown RBP10.4□□□□□ -0.74
RAB40B-204ENST00000571554 PLEKHA2Q9HB19 425 aa10.4□□□□□ -0.74
RAB40B-204ENST00000571554 KRASP01116 189 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 ELK1P19419 428 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 F2RP25116 425 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 GPR183P32249 361 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 G6PCP35575 357 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 ERVK-16P61578 105 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 GUCA2BQ16661 112 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 HAGHQ16775 308 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 OR6F1Q8NGZ6 308 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 GPX8Q8TED1 209 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 WDR89Q96FK6 387 aaPredicted RBP10.39□□□□□ -0.75
RAB40B-204ENST00000571554 QTRT1Q9BXR0 403 aaKnown RBP10.39□□□□□ -0.75
RAB40B-204ENST00000571554 RETNQ9HD89 108 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 COMMD9Q9P000 198 aa10.39□□□□□ -0.75
RAB40B-204ENST00000571554 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 SMIM31A0A1B0GVY4 71 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 ZNF785A8K8V0 405 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 A8MZ25 164 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 C3orf84H3BNL1 204 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 GPR31O00270 319 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 CLEC3BP05452 202 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 OR13C7P0DN81 318 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 HIST1H1BP16401 226 aaKnown RBP10.38□□□□□ -0.75
RAB40B-204ENST00000571554 TSPAN5P62079 268 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 ZNF585BQ52M93 769 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 ZFAND6Q6FIF0 208 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 CD300LFQ8TDQ1 290 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 DGCR14Q96DF8 476 aaKnown RBP10.38□□□□□ -0.75
RAB40B-204ENST00000571554 NEURL2Q9BR09 285 aa10.38□□□□□ -0.75
RAB40B-204ENST00000571554 DYNC2H1Q8NCM8 4307 aaKnown RBP10.37□□□□□ -0.75
RAB40B-204ENST00000571554 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 FAM25AB3EWG3 89 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 FAM25CB3EWG5 89 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 FAM25GB3EWG6 89 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 M0QYG6 137 aa10.37□□□□□ -0.75
RAB40B-204ENST00000571554 LGALS9O00182 355 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms