RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CLEC12BQ2HXU8 276 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 CYB5R2Q6BCY4 276 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 OR2A2Q6IF42 318 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 REG3GQ6UW15 175 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF600Q6ZNG1 722 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 LINC00596Q86U02 117 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 STX12Q86Y82 276 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ZFP82Q8N141 532 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 FADS6Q8N9I5 356 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 NFAM1Q8NET5 270 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MAFIPQ8WZ33 124 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MRPL24Q96A35 216 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 NIPSNAP3BQ9BS92 247 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 GGACTQ9BVM4 153 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 HES7Q9BYE0 225 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 DEFB127Q9H1M4 99 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 BANF2Q9H503 90 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 GPR173Q9NS66 373 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 LYRM2Q9NU23 88 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MED29Q9NX70 200 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 IGKV1D-43A0A0B4J1Z2 117 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 C15orf61A6NNL5 157 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 C9JQL5 133 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 TSTD3H0UI37 97 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 PPP1R2P9O14990 202 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 PDCD6O75340 191 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 OPN1MWP04001 364 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 CST2P09228 141 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 OPN1MW2P0DN77 364 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 OPN1MW3P0DN78 364 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 HIST1H1BP16401 226 aaKnown RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 ATP5J2P56134 94 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 FBXW4P57775 412 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 UBE2KP61086 200 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 PCBD1P61457 104 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 PKIAP61925 76 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 EWSR1Q01844 656 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 SRSF9Q13242 221 aaKnown RBP eCLIP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 TAF9Q16594 264 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM30BQ3MIR4 351 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 AKR1C8PQ5T2L2 129 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM42Q69YG0 159 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 SLC16A13Q7RTY0 426 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 ANKHD1Q8IWZ3 2542 aaKnown RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 H1FOOQ8IZA3 346 aaPredicted RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM251Q8N6I4 163 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 RNASEH2CQ8TDP1 164 aaKnown RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 CD300LFQ8TDQ1 290 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 SGK3Q96BR1 496 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 FOXN4Q96NZ1 517 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 PSMG3Q9BT73 122 aaPredicted RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 FNDC4Q9H6D8 234 aaPredicted RBP3.34□□□□□ -1.87
LINC00561-201ENST00000565815 NGBQ9NPG2 151 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 SLC2A9Q9NRM0 540 aa3.34□□□□□ -1.87
LINC00561-201ENST00000565815 SEC16AO15027 2179 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 HEATR5AQ86XA9 2040 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 TRBV24-1A0A075B6N3 115 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KIR2DS1A0A191URI9 304 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF850A8MQ14 1090 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 SRP19P09132 144 aaKnown RBP3.34□□□□□ -1.88
LINC00561-201ENST00000565815 NQO2P16083 231 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 SERPINA2P20848 420 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 VDAC1P21796 283 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 CEACAM6P40199 344 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KIR2DS4P43632 304 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 RBP2P50120 134 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 EFNA3P52797 238 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 TAS2R30P59541 319 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 SERF2P84101 59 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KIR2DS1Q14954 304 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 UBE2V2Q15819 145 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 MPV17LQ2QL34 196 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KRTAP27-1Q3LI81 207 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 FAM106AQ4KMX7 169 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 OR2B11Q5JQS5 317 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 FAM27BQ5VT28 67 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 FAM24BQ8N5W8 94 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 APCDD1LQ8NCL9 501 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 OR2M3Q8NG83 312 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 OR2G3Q8NGZ4 309 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 PINX1Q96BK5 328 aaKnown RBP3.34□□□□□ -1.88
LINC00561-201ENST00000565815 NOL4LQ96MY1 436 aaPredicted RBP3.34□□□□□ -1.88
LINC00561-201ENST00000565815 RAB40CQ96S21 281 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 ATP5SQ99766 215 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 NKX3-1Q99801 234 aaPredicted RBP3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KLHDC3Q9BQ90 382 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 AGMATQ9BSE5 352 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM222Q9H0R3 208 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 KLRF1Q9NZS2 232 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 PITPNC1Q9UKF7 332 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 SLC7A11Q9UPY5 501 aa3.34□□□□□ -1.88
LINC00561-201ENST00000565815 RCL1Q9Y2P8 373 aaKnown RBP3.34□□□□□ -1.88
LINC00561-201ENST00000565815 ARHGAP21Q5T5U3 1957 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 TRBV6-6A0A0A6YYG2 114 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 C3orf85A0A1B0GTC6 90 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 A0A1B0GU03 582 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 H3BQ15 152 aa3.33□□□□□ -1.88
LINC00561-201ENST00000565815 CLDN34H7C241 214 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms