RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TMEM213A2RRL7 107 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 HPRT1P00492 218 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
CCNF-203ENST00000564236 CD7P09564 240 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 CBLN1P23435 193 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 OR2B8PP59922 312 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 CATR1Q13166 79 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 KCTD21Q4G0X4 260 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 IDNKQ5T6J7 187 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 OR5AP2Q8NGF4 316 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 CD300LFQ8TDQ1 290 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 DYNLRB2Q8TF09 96 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 EEF1AKMT3Q96AZ1 226 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 CXorf58Q96LI9 332 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 PLEKHA2Q9HB19 425 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 PLEKHA3Q9HB20 300 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 ANAPC10Q9UM13 185 aa12.59□□□□□ -0.39
CCNF-203ENST00000564236 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.4
CCNF-203ENST00000564236 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.4
CCNF-203ENST00000564236 TNFSF12O43508 249 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.4
CCNF-203ENST00000564236 PTHLHP12272 177 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 NQO2P16083 231 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 EDN2P20800 178 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 ARL3P36405 182 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 THOC7Q6I9Y2 204 aaKnown RBP12.58□□□□□ -0.4
CCNF-203ENST00000564236 CLEC19AQ6UXS0 136 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
CCNF-203ENST00000564236 LOC100506127A0A0U1RQW1 187 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 UPK2O00526 184 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 XRCC3O43542 346 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 C8orf88P0DMB2 117 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 DHRS11Q6UWP2 260 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 COMMD9Q9P000 198 aa12.57□□□□□ -0.4
CCNF-203ENST00000564236 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 SULT1C2O00338 296 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 MYOD1P15172 320 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 GNRHRP30968 328 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 HSD17B13Q7Z5P4 300 aaPredicted RBP12.56□□□□□ -0.4
CCNF-203ENST00000564236 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 MARC2Q969Z3 335 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 WDR89Q96FK6 387 aaPredicted RBP12.56□□□□□ -0.4
CCNF-203ENST00000564236 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
CCNF-203ENST00000564236 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 IGHV3-23P01764 117 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 DEFA4P12838 97 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 NAT1P18440 290 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCNF-203ENST00000564236 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
CCNF-203ENST00000564236 ZNF57Q68EA5 555 aaPredicted RBP12.55□□□□□ -0.4
CCNF-203ENST00000564236 TMEM61Q8N0U2 210 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 QTRT1Q9BXR0 403 aaKnown RBP12.55□□□□□ -0.4
CCNF-203ENST00000564236 ZNF436Q9C0F3 470 aaPredicted RBP12.55□□□□□ -0.4
CCNF-203ENST00000564236 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 THYN1Q9P016 225 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 MLXQ9UH92 298 aa12.55□□□□□ -0.4
CCNF-203ENST00000564236 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 REG1AP05451 166 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 CLEC3BP05452 202 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 FXYD4P59646 89 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 SLC16A13Q7RTY0 426 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 UXS1Q8NBZ7 420 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 VN1R17PQ8TDU5 208 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 S100A16Q96FQ6 103 aaKnown RBP12.54□□□□□ -0.4
CCNF-203ENST00000564236 COMMD5Q9GZQ3 224 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 RETNQ9HD89 108 aa12.54□□□□□ -0.4
CCNF-203ENST00000564236 S1PR2O95136 353 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 F2RP25116 425 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 NEDD8Q15843 81 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 UBE2NLQ5JXB2 153 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 UNQ9165/PRO28630Q6UXU0 137 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 GDPD1Q8N9F7 314 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 GAR1Q9NY12 217 aaKnown RBP12.53□□□□□ -0.4
CCNF-203ENST00000564236 MRPL27Q9P0M9 148 aaKnown RBP12.53□□□□□ -0.4
CCNF-203ENST00000564236 S4R3C0 116 aa12.53□□□□□ -0.4
CCNF-203ENST00000564236 ZNF320A2RRD8 509 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 MARCH11A6NNE9 402 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 SERPINE2P07093 398 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 HERV-K104P61576 105 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 ANKRD55Q3KP44 614 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 AADACL3Q5VUY0 350 aa12.52□□□□□ -0.41
CCNF-203ENST00000564236 TMEM17Q86X19 198 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms