RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.53□□□□□ -0.88
SMAD3-208ENST00000558827 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 FAM223BA6NKX1 122 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 BRI3O95415 125 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 HPRT1P00492 218 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 KRASP01116 189 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 DEFA4P12838 97 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 NQO2P16083 231 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 MAS1LP35410 378 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 G6PCP35575 357 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 TAS2R46P59540 309 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 OR2B8PP59922 312 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 CTF1Q16619 201 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 TATDN3Q17R31 274 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 SLC25A42Q86VD7 318 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 FAM223AQ8IWN6 122 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 NECAP1Q8NC96 275 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 FCAMRQ8WWV6 532 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 BET1LQ9NYM9 111 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 ZNF257Q9Y2Q1 563 aa9.53□□□□□ -0.88
SMAD3-208ENST00000558827 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 IGHV3-35A0A0C4DH35 117 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 GPR31O00270 319 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 NHLRC4P0CG21 123 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-208ENST00000558827 CTRB1P17538 263 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 TAS2R31P59538 309 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 MSMO1Q15800 293 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 MZT2AQ6P582 158 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 ADAMTSL5Q6ZMM2 481 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 Q8N1Y9 231 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 WWC2-AS2Q96NR7 200 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 COMMD5Q9GZQ3 224 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 EXTL2Q9UBQ6 330 aa9.52□□□□□ -0.89
SMAD3-208ENST00000558827 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 MFSD2BA6NFX1 497 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 RBFOX2O43251 390 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMAD3-208ENST00000558827 GABARAPO95166 117 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 CRYGCP07315 174 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 ZNF182P17025 639 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-208ENST00000558827 PI3P19957 117 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 F2RP25116 425 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 ERVK-16P61578 105 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 SPCS2Q15005 226 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 GPR141Q7Z602 305 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 OR52I2Q8NH67 350 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 OR4A5Q8NH83 315 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 CACNG8Q8WXS5 425 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 DGCR14Q96DF8 476 aaKnown RBP9.51□□□□□ -0.89
SMAD3-208ENST00000558827 PLEKHA2Q9HB19 425 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 KLK11Q9UBX7 282 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 DMRT1Q9Y5R6 373 aa9.51□□□□□ -0.89
SMAD3-208ENST00000558827 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 OR13C7P0DN81 318 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 IGHV4-30-4P0DP06 118 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 PGAM2P15259 253 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 RCVRNP35243 200 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 ARL3P36405 182 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 POU2AF1Q16633 256 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 SLC25A24Q6NUK1 477 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 TBC1D26Q86UD7 250 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 CLVS1Q8IUQ0 354 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-208ENST00000558827 CMTM1Q8IZ96 169 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 EEF1AKMT3Q96AZ1 226 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 CCDC140Q96MF4 163 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 AIFM2Q9BRQ8 373 aa9.5□□□□□ -0.89
SMAD3-208ENST00000558827 MRPS26Q9BYN8 205 aaKnown RBP9.5□□□□□ -0.89
SMAD3-208ENST00000558827 IGLV11-55A0A075B6I3 123 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 DBX1A6NMT0 343 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 MARCH11A6NNE9 402 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 CTDSP2O14595 271 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 RGS5O15539 181 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
SMAD3-208ENST00000558827 CLEC3BP05452 202 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 TRAPPC2P0DI81 140 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 TRAPPC2BP0DI82 140 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 ALDH3B2P48448 385 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 GUCA2BQ16661 112 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 IZUMO4Q1ZYL8 232 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
SMAD3-208ENST00000558827 CD300LFQ8TDQ1 290 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 DYNLRB2Q8TF09 96 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 CMTM3Q96MX0 182 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 ABHD1Q96SE0 405 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
SMAD3-208ENST00000558827 MIXL1Q9H2W2 232 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 SCPEP1Q9HB40 452 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 COMMD9Q9P000 198 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 OR51B2Q9Y5P1 312 aa9.49□□□□□ -0.89
SMAD3-208ENST00000558827 C2orf70A6NJV1 201 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 H0Y980 276 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 SNAPC5O75971 98 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 DHFRP00374 187 aa9.48□□□□□ -0.89
SMAD3-208ENST00000558827 CD3DP04234 171 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms