RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TMEM267Q0VDI3 215 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-221ENST00000555773 TNXAQ16473 311 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 THOC7Q6I9Y2 204 aaKnown RBP9.86□□□□□ -0.83
SHMT2-221ENST00000555773 Q6ZNX1 250 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 Q6ZSV7 163 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 SLC35E3Q7Z769 313 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 OR1L8Q8NGR8 309 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 OR52E5Q8NH55 327 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
SHMT2-221ENST00000555773 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 CACNG5Q9UF02 275 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 NSG2Q9Y328 171 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 OR51B2Q9Y5P1 312 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 C2CD3Q4AC94 2353 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-221ENST00000555773 AP4M1O00189 453 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 PITX3O75364 302 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 TRAPPC2P0DI81 140 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 TRAPPC2BP0DI82 140 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 RPL27AP46776 148 aaKnown RBP9.85□□□□□ -0.83
SHMT2-221ENST00000555773 CRIP2P52943 208 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-221ENST00000555773 GNB1P62873 340 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 SSBP2P81877 361 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-221ENST00000555773 IZUMO4Q1ZYL8 232 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-221ENST00000555773 OR2T6Q8NHC8 308 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 SGMS2Q8NHU3 365 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 ARPC1AQ92747 370 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 HSPB9Q9BQS6 159 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 PDCD10Q9BUL8 212 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 MED28Q9H204 178 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
SHMT2-221ENST00000555773 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 C13orf42A0A1B0GVH6 325 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 C5orf51A6NDU8 294 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 MSGN1A6NI15 193 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 FAM90A26D6RGX4 464 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 IFNA17P01571 189 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 HKR1P10072 659 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 EGR2P11161 476 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 OR2B8PP59922 312 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 SPCS3P61009 180 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 CYCSP99999 105 aaKnown RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 IAH1Q2TAA2 248 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 PDLIM3Q53GG5 364 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 AKIRIN2Q53H80 203 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 GSG1LQ6UXU4 331 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 Q6ZS46 218 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 PRIMA1Q86XR5 153 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 OR4F5Q8NH21 305 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 OR1S1Q8NH92 325 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 SRSF12Q8WXF0 261 aaKnown RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 C2orf50Q96LR7 162 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 QTRT1Q9BXR0 403 aaKnown RBP9.84□□□□□ -0.83
SHMT2-221ENST00000555773 GON7Q9BXV9 100 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
SHMT2-221ENST00000555773 TNCP24821 2201 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 A0A1W2PN81 502 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 FAM25EA8MYX2 175 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 ST8SIA3O43173 380 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 CHRNA7P36544 502 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-221ENST00000555773 ID3Q02535 119 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 MRPL41Q8IXM3 137 aaKnown RBP9.83□□□□□ -0.84
SHMT2-221ENST00000555773 ZBTB8BQ8NAP8 495 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-221ENST00000555773 OR5M8Q8NGP6 311 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 GRPEL2Q8TAA5 225 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 OR10C1Q96KK4 312 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 HSPB7Q9UBY9 170 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 NF1P21359 2839 aa9.83□□□□□ -0.84
SHMT2-221ENST00000555773 MPTX1A8MV57 137 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 INS-IGF2F8WCM5 200 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 CCSO14618 274 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 GOSR2O14653 212 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 ATP6V0E1O15342 81 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 MED6O75586 246 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 LY86O95711 162 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 OPN1MWP04001 364 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 OPN1MW2P0DN77 364 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 OPN1MW3P0DN78 364 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 RRAS2P62070 204 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-221ENST00000555773 NDPQ00604 133 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 PRCDQ00LT1 54 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 TNFRSF9Q07011 255 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 FOXL1Q12952 345 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 C2orf68Q2NKX9 166 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 C10orf55Q5SWW7 151 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 OR4D5Q8NGN0 318 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 LINC01006Q8NI28 216 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 ABHD5Q8WTS1 349 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 FYTTD1Q96QD9 318 aaKnown RBP9.82□□□□□ -0.84
SHMT2-221ENST00000555773 ZFP57Q9NU63 452 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 SERTAD4Q9NUC0 356 aa9.82□□□□□ -0.84
SHMT2-221ENST00000555773 GSKIPQ9P0R6 139 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms