RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 ADCYAP1P18509 176 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 RAB9AP51151 201 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 ACTL10Q5JWF8 245 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 FAM53AQ6NSI3 398 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-204ENST00000555759 TEX38Q6PEX7 206 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 ZNF418Q8TF45 676 aaPredicted RBP14.87□□□□□ -0.03
SYNE3-204ENST00000555759 PPIAL4AQ9Y536 164 aa14.87□□□□□ -0.03
SYNE3-204ENST00000555759 TRGV8A0A0C4DH27 118 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 IGHV5-10-1A0A0J9YXX1 117 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 PRSS2P07478 247 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 HCP5Q6MZN7 132 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 LHFPL1Q86WI0 220 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 ZNF664Q8N3J9 261 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 SCARF2Q96GP6 870 aaPredicted RBP14.86□□□□□ -0.03
SYNE3-204ENST00000555759 CX3CL1P78423 397 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 LINC00305Q7Z4B0 112 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 OR10J6PQ8NGY7 276 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 NPIPB3Q92617 1050 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 IFI27L2Q9H2X8 130 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 A0A1W2PQF6 199 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 LYPD3O95274 346 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 C1orf53Q5VUE5 145 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 TRBV20OR9-2A0A075B6H5 130 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 NBEAP1P0C6P0 100 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 HSD52Q0P140 79 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 MCM3APO60318 1980 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 UMODP07911 640 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 OR4C13Q8NGP0 309 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 AGMATQ9BSE5 352 aa14.86□□□□□ -0.03
SYNE3-204ENST00000555759 HIGD1CA8MV81 97 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 LDLRAD4O15165 306 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 TSPAN7P41732 249 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 PAQR4Q8N4S7 273 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-204ENST00000555759 A0A1W2PQM1 296 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 A8MWP6 167 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 CCL1P22362 96 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 IGHV2-70P01814 119 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 TEX29Q8N6K0 151 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 LYL1P12980 280 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 FCGR2BP31994 310 aaPredicted RBP14.85□□□□□ -0.03
SYNE3-204ENST00000555759 ORMDL3Q8N138 153 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 LPAR2Q9HBW0 351 aa14.85□□□□□ -0.03
SYNE3-204ENST00000555759 MFAP4P55083 255 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-204ENST00000555759 SGK494Q96LW2 274 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 IFNL4K9M1U5 179 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 CACNG8Q8WXS5 425 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 GPR82Q96P67 336 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 ANAPC13Q9BS18 74 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 TTTY12Q9BZ98 90 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 COL4A1P02462 1669 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 GZMBP10144 247 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 IGFBP2P18065 325 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 PHLDA3Q9Y5J5 127 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 HILPDAQ9Y5L2 63 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 ZIC3O60481 467 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 PPP1R17O96001 155 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 GPR6P46095 362 aaPredicted RBP14.84□□□□□ -0.03
SYNE3-204ENST00000555759 DLX6P56179 175 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 ZNF826PQ6ZT77 177 aa14.84□□□□□ -0.03
SYNE3-204ENST00000555759 F2RL2O00254 374 aa14.83□□□□□ -0.03
SYNE3-204ENST00000555759 IGHV4-34P06331 123 aa14.83□□□□□ -0.03
SYNE3-204ENST00000555759 CCL13Q99616 98 aa14.83□□□□□ -0.03
SYNE3-204ENST00000555759 HES7Q9BYE0 225 aa14.83□□□□□ -0.03
SYNE3-204ENST00000555759 PROB1E7EW31 1015 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 CD3EP07766 207 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 ATP5L2Q7Z4Y8 100 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 OR9G4Q8NGQ1 327 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 ZNF703Q9H7S9 590 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-204ENST00000555759 CIARTQ8N365 385 aaPredicted RBP14.83□□□□□ -0.04
SYNE3-204ENST00000555759 OCC1Q8TAD7 63 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 MRPS16Q9Y3D3 137 aaKnown RBP14.83□□□□□ -0.04
SYNE3-204ENST00000555759 NAPSAO96009 420 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 KIR2DL4Q99706 377 aa14.83□□□□□ -0.04
SYNE3-204ENST00000555759 IGHV1-45A0A0A0MS14 117 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 SYNGR3O43761 229 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 TMEM186Q96B77 213 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 A0A1W2PRE2 83 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 PRR32B1ATL7 298 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 TMEM50AO95807 157 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 IGKV1D-43A0A0B4J1Z2 117 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 VKORC1L1Q8N0U8 176 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 C18orf15Q96N68 181 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 RASL11AQ6T310 242 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 RNASEH2CQ8TDP1 164 aaKnown RBP14.82□□□□□ -0.04
SYNE3-204ENST00000555759 METTL26Q96S19 204 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 FOXC2Q99958 501 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 LINC00470Q9BZP3 86 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 RNASE7Q9H1E1 156 aaKnown RBP14.82□□□□□ -0.04
SYNE3-204ENST00000555759 RABAC1Q9UI14 185 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 TIMP3P35625 211 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 SUPT4H1P63272 117 aaKnown RBP14.82□□□□□ -0.04
SYNE3-204ENST00000555759 TM4SF20Q53R12 229 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 MIR17HGQ75NE6 70 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 R4GN57 208 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 ANKRD36A6QL64 1941 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
SYNE3-204ENST00000555759 NRN1LQ496H8 165 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms