RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CDKN1AP38936 164 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 ARG2P78540 354 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 SPATA31B1PQ5VZV4 182 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 FAM216AQ8WUB2 273 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 OPN3Q9H1Y3 402 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-202ENST00000553340 FRYQ5TBA9 3013 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 PRDX2P32119 198 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 RPL19P84098 196 aaKnown RBP14.5□□□□□ -0.09
SYNE3-202ENST00000553340 RPL39P5Q59GN2 51 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 ARSJQ5FYB0 599 aaPredicted RBP14.5□□□□□ -0.09
SYNE3-202ENST00000553340 OR4P4Q8NGL7 312 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 MSL2Q9HCI7 577 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 MED13Q9UHV7 2174 aa14.5□□□□□ -0.09
SYNE3-202ENST00000553340 TMEM164Q5U3C3 297 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 CDX2Q99626 313 aaPredicted RBP14.49□□□□□ -0.09
SYNE3-202ENST00000553340 LRFN3Q9BTN0 628 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 TMEM208Q9BTX3 173 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 GNB1LQ9BYB4 327 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 DLEU1O43261 78 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 FOXH1O75593 365 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 AREGP15514 252 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 LRP11Q86VZ4 500 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 GCNT2Q8N0V5 402 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 SIGLECL1Q8N7X8 197 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 LRRC29Q8WV35 223 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 V9GYV3 84 aa14.49□□□□□ -0.09
SYNE3-202ENST00000553340 BTF3P20290 206 aaKnown RBP14.48□□□□□ -0.09
SYNE3-202ENST00000553340 NPY1RP25929 384 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 HOXC12P31275 282 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 KIR2DS2P43631 304 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 FABP6P51161 128 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 RNFT1Q5M7Z0 435 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 FAM90A1Q86YD7 464 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 OR8I2Q8N0Y5 310 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 SLC24A4Q8NFF2 622 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 FZR1Q9UM11 496 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 CELSR3Q9NYQ7 3312 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 TET2Q6N021 2002 aaPredicted RBP14.48□□□□□ -0.09
SYNE3-202ENST00000553340 F2Z2F3 143 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 AGFG2O95081 481 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 Q6ZT83 130 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 GOLT1BQ9Y3E0 138 aa14.48□□□□□ -0.09
SYNE3-202ENST00000553340 CGAP01215 116 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 IGKV3-15P01624 115 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 GNG4P50150 75 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 OR5I1Q13606 314 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 C15orf61A6NNL5 157 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 MT-ND6P03923 174 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 FRMD6-AS1P0C7T7 363 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 GAGE1Q13065 139 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 ST6GALNAC3Q8NDV1 305 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 OR4S2Q8NH73 311 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 IFI27L2Q9H2X8 130 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 ENY2Q9NPA8 101 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 ARL2-SNX15V9GYD0 113 aa14.47□□□□□ -0.09
SYNE3-202ENST00000553340 HELTA6NFD8 242 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 A6NNC1 897 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 IGHV3-13P01766 116 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 IGHV3-7P01780 117 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 BRS3P32247 399 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 TNFSF10P50591 281 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 CYB5R2Q6BCY4 276 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 WDR73Q6P4I2 378 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 CORO2AQ92828 525 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 FER1L6-AS2Q96M78 137 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 SFXN3Q9BWM7 321 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 TUBG2Q9NRH3 451 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 ZNF586Q9NXT0 402 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 NAT8BQ9UHF3 227 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 GPX1P07203 203 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 COMPP49747 757 aaPredicted RBP14.46□□□□□ -0.09
SYNE3-202ENST00000553340 ZNF134P52741 427 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 CENPWQ5EE01 88 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 PPP1R35Q8TAP8 253 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 GNB4Q9HAV0 340 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 DUSP13Q9UII6 198 aa14.46□□□□□ -0.09
SYNE3-202ENST00000553340 A0A1W2PNU3 283 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 MGST3O14880 152 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 OR10J4P0C629 311 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 LOXL3P58215 753 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PRR20EP86478 221 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PRR20CP86479 221 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PRR20DP86480 221 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PRR20BP86481 221 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PRR20AP86496 221 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 LPAL2Q16609 132 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 FAM214BQ7L5A3 538 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 FAM103A1Q9BTL3 118 aaKnown RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 TMEM167BQ9NRX6 74 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 SLC25A10Q9UBX3 287 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 IL19Q9UHD0 177 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 IGFBP2P18065 325 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 KRTDAPP60985 99 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 HSPE1P61604 102 aaKnown RBP14.45□□□□□ -0.1
SYNE3-202ENST00000553340 CX3CL1P78423 397 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 MZT1Q08AG7 82 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 PSG5Q15238 335 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 CR1LQ2VPA4 569 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 COX19Q49B96 90 aa14.45□□□□□ -0.1
SYNE3-202ENST00000553340 MIR17HGQ75NE6 70 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms