RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PSMB9P28065 219 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 FCGR2CP31995 323 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 GPR183P32249 361 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 RANBP1P43487 201 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 OR2B8PP59922 312 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 RPL8P62917 257 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 MXD1Q05195 221 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 TIMM50Q3ZCQ8 353 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 SFXN4Q6P4A7 337 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 SPAG16Q8N0X2 631 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 RHBDL2Q9NX52 303 aa8.61□□□□□ -1.03
PRPF40B-212ENST00000551111 AGRNO00468 2067 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 TRAV18A0A075B6X5 111 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 IGHV3OR16-8A0A075B7F1 116 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 MEIS3P1A6NDR6 274 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 SLC22A5O76082 557 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 JTBO76095 146 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 S1PR2O95136 353 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 C8orf88P0DMB2 117 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 MAS1LP35410 378 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 MFAP2P55001 183 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ARL6IP1Q15041 203 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 FAM106AQ4KMX7 169 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 FAM209BQ5JX69 171 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ZNF66Q6ZN08 573 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ZNF818PQ6ZRF7 136 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 OR52B4Q8NGK2 314 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 OR13F1Q8NGS4 319 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ZNF502Q8TBZ5 544 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 EEF1AKMT3Q96AZ1 226 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 ZNF414Q96IQ9 312 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 CENPOQ9BU64 300 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 HRASLSQ9HDD0 168 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 UBQLN2Q9UHD9 624 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
PRPF40B-212ENST00000551111 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 UPK2O00526 184 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 HRASP01112 189 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 PPYP01298 95 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 DEFA4P12838 97 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 FXYD4P59646 89 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 PMS2P11Q13670 270 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 SLC16A13Q7RTY0 426 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 IL17DQ8TAD2 202 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 BET1LQ9NYM9 111 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 BLOC1S6Q9UL45 172 aa8.59□□□□□ -1.03
PRPF40B-212ENST00000551111 LOC102724200A0A096LPH7 203 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 A0A0J9YWU9 116 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 ZNF207O43670 478 aaKnown RBP8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 TGFBR1P36897 503 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 GABARAPL2P60520 117 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 WT1-ASQ06250 92 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 POU2AF1Q16633 256 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 TPRA1Q86W33 373 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 HOGA1Q86XE5 327 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 CHRDL1Q9BU40 450 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 TMEM140Q9NV12 185 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 RAB26Q9ULW5 256 aa8.58□□□□□ -1.04
PRPF40B-212ENST00000551111 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 OR2T8A6NH00 312 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 HIST1H1BP16401 226 aaKnown RBP8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 ARPC4P59998 168 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 IDNKQ5T6J7 187 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 TMEM17Q86X19 198 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 ZNF436Q9C0F3 470 aaPredicted RBP8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 AUNIPQ9H7T9 357 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 SSR3Q9UNL2 185 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 VPS13DQ5THJ4 4388 aa8.57□□□□□ -1.04
PRPF40B-212ENST00000551111 LOC100506127A0A0U1RQW1 187 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 RBFOX2O43251 390 aaKnown RBP eCLIP8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 TGOLN2O43493 480 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 LY6G6CO95867 125 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 DHFRP00374 187 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 HPRT1P00492 218 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 OR13C7P0DN81 318 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 PTBP1P26599 531 aaKnown RBP eCLIP8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 GNRHRP30968 328 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 ADMP35318 185 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 RFX2P48378 723 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 HSPA13P48723 471 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 TAS2R31P59538 309 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 ZNF124Q15973 351 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 DEFB135Q30KP9 77 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 ODF3L2Q3SX64 289 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 PLET1Q6UQ28 207 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 OR1L6Q8NGR2 347 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 OR4A5Q8NH83 315 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 CXorf58Q96LI9 332 aa8.56□□□□□ -1.04
PRPF40B-212ENST00000551111 VCX3BQ9H321 246 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms