RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 WSB1Q9Y6I7 421 aa16.87■□□□□ 0.29
NEK3-202ENST00000550841 MSGN1A6NI15 193 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 H2AFB2P0C5Z0 115 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 OR4E1P0C645 316 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 RPL27AP46776 148 aaKnown RBP16.86■□□□□ 0.29
NEK3-202ENST00000550841 NDPQ00604 133 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 C4orf46Q504U0 113 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 TEX38Q6PEX7 206 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 UNQ5815/PRO19632Q6UWF5 114 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 WIPF2Q8TF74 440 aaPredicted RBP16.86■□□□□ 0.29
NEK3-202ENST00000550841 NUDT15Q9NV35 164 aa16.86■□□□□ 0.29
NEK3-202ENST00000550841 TRAV3A0A0B4J244 114 aa16.85■□□□□ 0.29
NEK3-202ENST00000550841 IGKV1-5P01602 117 aa16.85■□□□□ 0.29
NEK3-202ENST00000550841 ANXA7P20073 488 aaKnown RBP16.85■□□□□ 0.29
NEK3-202ENST00000550841 SSBP2P81877 361 aaPredicted RBP16.85■□□□□ 0.29
NEK3-202ENST00000550841 ECSCRQ19T08 205 aa16.85■□□□□ 0.29
NEK3-202ENST00000550841 LFNGQ8NES3 379 aa16.85■□□□□ 0.29
NEK3-202ENST00000550841 LSM10Q969L4 123 aaKnown RBP16.85■□□□□ 0.29
NEK3-202ENST00000550841 FAM103A1Q9BTL3 118 aaKnown RBP16.85■□□□□ 0.29
NEK3-202ENST00000550841 FBXO7Q9Y3I1 522 aa16.85■□□□□ 0.29
NEK3-202ENST00000550841 TRAV6A0A075B6T7 132 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 A0A0B4J2A0 478 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 DUXBA0A1W2PPF3 345 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 C9orf170A2RU37 121 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 G3V318 75 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 FBXO24O75426 580 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 RBMXL2O75526 392 aaKnown RBP16.84■□□□□ 0.29
NEK3-202ENST00000550841 HLA-AP01891 365 aaKnown RBP16.84■□□□□ 0.29
NEK3-202ENST00000550841 ELANEP08246 267 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 OR9G9P0C7N8 305 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 THOC7Q6I9Y2 204 aaKnown RBP16.84■□□□□ 0.29
NEK3-202ENST00000550841 PLET1Q6UQ28 207 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 LYG2Q86SG7 212 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 ZNF329Q86UD4 541 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 LRTM2Q8N967 370 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 MINDY2Q8NBR6 621 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 OR1L8Q8NGR8 309 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 COQ8AQ8NI60 647 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 LHFPL5Q8TAF8 219 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 CASTOR1Q8WTX7 329 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 SRSF8Q9BRL6 282 aaKnown RBP16.84■□□□□ 0.29
NEK3-202ENST00000550841 SHPKQ9UHJ6 478 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 FOXA2Q9Y261 457 aaPredicted RBP16.84■□□□□ 0.29
NEK3-202ENST00000550841 OR51B2Q9Y5P1 312 aa16.84■□□□□ 0.29
NEK3-202ENST00000550841 IGHG4P01861 327 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 PPIFP30405 207 aaKnown RBP16.83■□□□□ 0.28
NEK3-202ENST00000550841 MECP2P51608 486 aaKnown RBP16.83■□□□□ 0.28
NEK3-202ENST00000550841 DHRS2Q13268 280 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 FOXE3Q13461 319 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 NRARPQ7Z6K4 114 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 OR5M8Q8NGP6 311 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 OR5B3Q8NH48 314 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 FYTTD1Q96QD9 318 aaKnown RBP16.83■□□□□ 0.28
NEK3-202ENST00000550841 CITED1Q99966 193 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 CACFD1Q9UGQ2 172 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 NSG2Q9Y328 171 aa16.83■□□□□ 0.28
NEK3-202ENST00000550841 TEX50A0A1B0GTY4 177 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 C15orf61A6NNL5 157 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 DUS4LO95620 317 aaKnown RBP16.82■□□□□ 0.28
NEK3-202ENST00000550841 OPN1MWP04001 364 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 P0C879 139 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 TRAPPC2P0DI81 140 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 TRAPPC2BP0DI82 140 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 OPN1MW2P0DN77 364 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 OPN1MW3P0DN78 364 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 CFHR3Q02985 330 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 C19orf54Q5BKX5 351 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 CXorf66Q5JRM2 361 aaPredicted RBP16.82■□□□□ 0.28
NEK3-202ENST00000550841 TMEM65Q6PI78 240 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 HSD17B13Q7Z5P4 300 aaPredicted RBP16.82■□□□□ 0.28
NEK3-202ENST00000550841 SLC35G3Q8N808 338 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 QTRT1Q9BXR0 403 aaKnown RBP16.82■□□□□ 0.28
NEK3-202ENST00000550841 TMEM14BQ9NUH8 114 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 ZNF257Q9Y2Q1 563 aa16.82■□□□□ 0.28
NEK3-202ENST00000550841 A0A1W2PN81 502 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 CHRNA7P36544 502 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 OR2B8PP59922 312 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 KRTAP10-3P60369 221 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 DCTN2Q13561 401 aaKnown RBP16.81■□□□□ 0.28
NEK3-202ENST00000550841 ANKRD55Q3KP44 614 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 C10orf55Q5SWW7 151 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 ZNF429Q86V71 674 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 MRPL41Q8IXM3 137 aaKnown RBP16.81■□□□□ 0.28
NEK3-202ENST00000550841 PDCD10Q9BUL8 212 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
NEK3-202ENST00000550841 PRR13Q9NZ81 148 aa16.81■□□□□ 0.28
NEK3-202ENST00000550841 TCRBV4S1A1TA0A5B7 111 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 H3BUA1 57 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 CD28P10747 220 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 HSPE1P61604 102 aaKnown RBP16.8■□□□□ 0.28
NEK3-202ENST00000550841 CD83Q01151 205 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 LYZL2Q7Z4W2 148 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 GPR146Q96CH1 333 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 ZFP57Q9NU63 452 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 TMED3Q9Y3Q3 217 aa16.8■□□□□ 0.28
NEK3-202ENST00000550841 A0A0B4J293 547 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 IGLV1-40P01703 118 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 IL5P05113 134 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 C10orf99Q6UWK7 81 aa16.79■□□□□ 0.28
NEK3-202ENST00000550841 TTC9CQ8N5M4 171 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms