RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GPHB5Q86YW7 130 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 CMTM1Q8IZ96 169 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 DMBX1Q8NFW5 382 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 OR5H2Q8NGV7 314 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 OR51H1Q8NH63 302 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 YIPF6Q96EC8 236 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 CITED4Q96RK1 184 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 GPHA2Q96T91 129 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 SPATA25Q9BR10 227 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 PALMDQ9NP74 551 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
YBX3-218ENST00000546298 MEIS3P1A6NDR6 274 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 PPP5D1E7EU14 171 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 E7EUB6 86 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 TPPPO94811 219 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 IFNA6P05013 189 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 FOLR2P14207 255 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 GNRHRP30968 328 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 TAS2R20P59543 309 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 OR2B8PP59922 312 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 LSM3P62310 102 aaKnown RBP7.1□□□□□ -1.27
YBX3-218ENST00000546298 DEFB114Q30KQ6 69 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 CD300EQ496F6 205 aaPredicted RBP7.1□□□□□ -1.27
YBX3-218ENST00000546298 LPCAT3Q6P1A2 487 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 ZNF818PQ6ZRF7 136 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 HSD17B13Q7Z5P4 300 aaPredicted RBP7.1□□□□□ -1.27
YBX3-218ENST00000546298 OR6F1Q8NGZ6 308 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 MOB3AQ96BX8 217 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 CMTM3Q96MX0 182 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 ZNF2Q9BSG1 426 aaPredicted RBP7.1□□□□□ -1.27
YBX3-218ENST00000546298 THAP7Q9BT49 309 aaPredicted RBP7.1□□□□□ -1.27
YBX3-218ENST00000546298 TMEM140Q9NV12 185 aa7.1□□□□□ -1.27
YBX3-218ENST00000546298 IGLV11-55A0A075B6I3 123 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 A0A1B0GW64 132 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 ZNF320A2RRD8 509 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 C2orf70A6NJV1 201 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 GPR31O00270 319 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 PGLYRP1O75594 196 aaPredicted RBP7.09□□□□□ -1.27
YBX3-218ENST00000546298 SNAPC5O75971 98 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 S1PR2O95136 353 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 PMP2P02689 132 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 CLEC3BP05452 202 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 TRAPPC2P0DI81 140 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 TRAPPC2BP0DI82 140 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 NAT1P18440 290 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 F2RP25116 425 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 TGFBR1P36897 503 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 LPAR6P43657 344 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 RFX2P48378 723 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 CD81P60033 236 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 GUCA2BQ16661 112 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 HAGHQ16775 308 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 CASC10Q5T4H9 136 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 CADM3Q8N126 398 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 OR1L8Q8NGR8 309 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 SLC25A46Q96AG3 418 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 ISOC1Q96CN7 298 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 DGCR14Q96DF8 476 aaKnown RBP7.09□□□□□ -1.27
YBX3-218ENST00000546298 NEURL2Q9BR09 285 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 QTRT1Q9BXR0 403 aaKnown RBP7.09□□□□□ -1.27
YBX3-218ENST00000546298 SCPEP1Q9HB40 452 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 ANAPC10Q9UM13 185 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 DMRT1Q9Y5R6 373 aa7.09□□□□□ -1.27
YBX3-218ENST00000546298 TNCP24821 2201 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 TRAV3A0A0B4J244 114 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 IGLC7A0M8Q6 106 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 ZNF785A8K8V0 405 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 IGHV3-23P01764 117 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 HLA-AP01891 365 aaKnown RBP7.08□□□□□ -1.28
YBX3-218ENST00000546298 APOA1P02647 267 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 REG1AP05451 166 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 MYOD1P15172 320 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 CBLN1P23435 193 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.28
YBX3-218ENST00000546298 TSPAN5P62079 268 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 ZNF57Q68EA5 555 aaPredicted RBP7.08□□□□□ -1.28
YBX3-218ENST00000546298 PLET1Q6UQ28 207 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 C19orf35Q6ZS72 473 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 OR1L6Q8NGR2 347 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 VN1R17PQ8TDU5 208 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 TSC22D3Q99576 134 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 ZC4H2Q9NQZ6 224 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 FKBP11Q9NYL4 201 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 COMMD3Q9UBI1 195 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 UFC1Q9Y3C8 167 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 CEPT1Q9Y6K0 416 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 S4R3C0 116 aa7.08□□□□□ -1.28
YBX3-218ENST00000546298 TRAV25A0A0B4J276 109 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 TEX50A0A1B0GTY4 177 aa7.07□□□□□ -1.28
YBX3-218ENST00000546298 CGB1A6NKQ9 187 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms